RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Atp2b3Q0VF55 1220 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Cnnm2Q3TWN3 875 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 SfpqQ8VIJ6 699 aaKnown RBP7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Vps36Q91XD6 386 aa7.68□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Serpinb6bO08804 377 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Haus2Q9CQS9 234 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 CenppQ9CZ92 286 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Gm7347D3YYI9 267 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Speer4aF8VPX6 267 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Syt1P46096 421 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Cfap157Q0VFX2 523 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ccdc122Q8BVN0 290 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ppfibp1Q8C8U0 969 aaKnown RBP7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tmem94Q7TSH8 1360 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Hmgb2P30681 210 aaKnown RBP7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 AmfrQ9R049 643 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Asic1Q6NXK8 526 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Zranb1Q7M760 708 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Amotl2Q8K371 772 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Exoc1Q8R3S6 894 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Hoxb7P09024 217 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 DmtnQ9WV69 405 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Mcm6P97311 821 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Sbno1Q689Z5 1390 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 TchpQ3TVW5 497 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Amotl1Q9D4H4 968 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Zfp853A0A1D5RM95 733 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Brd1E9PZ26 1189 aaKnown RBP7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Terf1P70371 421 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ttc12Q8BW49 704 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Atp8b2P98199 1209 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ccdc42Q5SV66 316 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 GckrQ91X44 587 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Znf394Q9Z1D9 521 aa7.67□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Grm8P47743 908 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Nsrp1Q5NCR9 542 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ppp4r3aQ6P2K6 820 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Cacna1dQ99246 2179 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Thoc2B1AZI6 1594 aaKnown RBP7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ppp1r10Q80W00 888 aaKnown RBP7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Fam76aQ922G2 307 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Lamc3Q9R0B6 1581 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 NpcdF8VQB8 469 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tyro3P55144 880 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tbc1d5Q80XQ2 815 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tmco5aQ9D9D5 303 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Plagl1Q9JLQ4 704 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Spocd1B1ASB6 936 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ctdp1Q7TSG2 960 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tmod2Q9JKK7 351 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Hip1rQ9JKY5 1068 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Fancd2Q80V62 1450 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Pa2g4P50580 394 aaKnown RBP7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 L1td1Q587J6 782 aaKnown RBP7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Tex19.1Q99MV2 351 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Catsper2A2ARP9 588 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 SlmapQ3URD3 845 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Taf7Q9R1C0 341 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Gm10093D3YYI8 482 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Fam186bD3Z420 943 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Hdac1O09106 482 aaKnown RBP7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Serpinc1P32261 465 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Dennd3A2RT67 1274 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Sptlc2P97363 560 aaKnown RBP7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 MthfsQ9D110 203 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Wdr62Q3U3T8 1523 aa7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Mrps25Q9D125 171 aaKnown RBP7.66□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Kifc2O08672 792 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Gas8Q60779 478 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ddx27Q921N6 760 aaKnown RBP7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Kdm5bQ80Y84 1544 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Ccnl1Q52KE7 532 aaKnown RBP7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Bloc1s4Q8VED2 215 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Yeats4Q9CR11 227 aaKnown RBP7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Rasal2E9PW37 1286 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 CalcaP70160 136 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Gimap8Q75N62 688 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Letm1Q9Z2I0 738 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Zhx1P70121 873 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Lmod1Q8BVA4 595 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Paip2Q9D6V8 124 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Plekhg2Q6KAU7 1340 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Myo1bP46735 1107 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 St5Q924W7 1134 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Egfl6Q9JJZ5 550 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Neurog2P70447 263 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 Zswim4Q8C7B8 1101 aa7.65□□□□□ -1.18
Scn8a-205ENSMUST00000108910 MarcksP26645 309 aaKnown RBP7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 HellsQ60848 821 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gimap5Q8BWF2 308 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Setdb1O88974 1307 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ano1Q8BHY3 960 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gramd4Q8CB44 633 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Akr1c19G3X9Y6 323 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Cers3Q1A3B0 383 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Luc7l2Q7TNC4 392 aaKnown RBP7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Acbd3Q8BMP6 525 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Shtn1Q8K2Q9 631 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Tbc1d8Q9Z1A9 1134 aa7.65□□□□□ -1.19
Scn8a-205ENSMUST00000108910 AU019823E9PUQ3 292 aa7.64□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms