RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Qtrt2B8ZXI1 415 aa18.11■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Slc1a4O35874 532 aa18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 MthfsQ9D110 203 aa18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Asxl2Q8BZ32 1370 aa18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Terf1P70371 421 aa18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Atp2b4Q6Q477 1205 aa18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Zranb1Q7M760 708 aa18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Naa15Q80UM3 865 aaKnown RBP18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Ttc21aQ8C0S4 1314 aa18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Kdm6aO70546 1401 aa18.1■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Gm45140A0A0N4SUM8 220 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 AnkarA2RT91 1465 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Fbf1A2A870 1173 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Cep120Q7TSG1 988 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Cetn2Q9R1K9 172 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Stat1P42225 749 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Fam83gQ5SWY7 812 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Pet2A2AHY8 747 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Rbbp8nlA2ABX0 614 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Txndc16Q7TN22 820 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Znf131Q8K3J5 619 aa18.09■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Fam208aQ69ZR9 1610 aaKnown RBP18.08■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Plekhg1F6S200 1446 aa18.08■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Brd3Q8K2F0 726 aaKnown RBP18.08■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Smco2Q9DA21 347 aa18.08■□□□□ 0.49
Clcn3-203ENSMUST00000093490 Snrpa1P57784 255 aaKnown RBP18.08■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Prdm11A2AGX3 565 aa18.08■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Map2k1P31938 393 aa18.08■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Rbm17Q8JZX4 405 aaKnown RBP18.08■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Ccdc93Q7TQK5 629 aa18.08■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Aldh8a1Q8BH00 487 aa18.08■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Themis2Q91YX0 663 aa18.08■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Metap2O08663 478 aaKnown RBP18.07■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Erich4Q3UNU4 136 aa18.07■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Cacna2d4Q5RJF7 1116 aa18.07■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Cfap73J3QPZ5 306 aa18.07■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Wdr17E9Q271 1322 aa18.07■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Ano10Q8BH79 659 aa18.07■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Gtf3c5Q8R2T8 520 aa18.07■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Atp10aO54827 1508 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Klhdc4Q921I2 584 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Tbc1d8bA3KGB4 1114 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Sdc2P43407 202 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Bbof1Q3V079 533 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Nkx1-2P42580 305 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Mcmdc2E9Q956 681 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Clul1Q3ZRW6 464 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 WtapQ9ER69 396 aa18.06■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Trim27Q62158 513 aa18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Hook3Q8BUK6 718 aa18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Calml4Q91WQ9 153 aa18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Gigyf1Q99MR1 1044 aaKnown RBP18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Krt23Q99PS0 422 aa18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Dennd3A2RT67 1274 aa18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Calm1P0DP26 149 aaKnown RBP18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Calm2P0DP27 149 aaKnown RBP18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Calm3P0DP28 149 aaKnown RBP18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Ctr9Q62018 1173 aaKnown RBP18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Brd1E9PZ26 1189 aaKnown RBP18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Esco1Q69Z69 843 aa18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Nlgn1Q99K10 843 aa18.05■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Usp5P56399 858 aaKnown RBP18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Aplp1Q03157 653 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Znf653Q6YND2 615 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Baiap2l1Q9DBJ3 514 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Akap2O54931 893 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Kif2aP28740 705 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Hook2Q7TMK6 716 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Letm1Q9Z2I0 738 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Cct2P80314 535 aaKnown RBP18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Rnf34Q99KR6 376 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Slc4a4O88343 1079 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Slc27a3O88561 667 aa18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Lmo7E9PYF4 1699 aaKnown RBP18.04■□□□□ 0.48
Clcn3-203ENSMUST00000093490 BbxQ8VBW5 907 aa18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Sil1Q9EPK6 465 aa18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Rad50P70388 1312 aa18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Phkg2Q9DB30 406 aa18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Arhgef1Q61210 920 aaKnown RBP18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Gm21985Q6P6P5 1106 aa18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Zbtb43Q9DAI4 467 aa18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Cc2d1bQ8BRN9 848 aa18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Dapk3O54784 448 aa18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Tubb4bP68372 445 aaKnown RBP18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Smc1aQ9CU62 1233 aaKnown RBP18.03■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Vamp4O70480 141 aa18.02■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Lrrc59Q922Q8 307 aaKnown RBP18.02■□□□□ 0.48
Clcn3-203ENSMUST00000093490 A0A1W2P7S8 802 aa18.02■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Cdc5lQ6A068 802 aaKnown RBP18.02■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Eif2ak4Q9QZ05 1648 aa18.02■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Cdk13Q69ZA1 1511 aaKnown RBP18.02■□□□□ 0.48
Clcn3-203ENSMUST00000093490 GmnnO88513 206 aa18.02■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Kcnj4P52189 445 aa18.02■□□□□ 0.48
Clcn3-203ENSMUST00000093490 Fam135bQ9DAI6 1403 aa18.02■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Stx8O88983 236 aa18.02■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Foxo3Q9WVH4 672 aa18.02■□□□□ 0.47
Clcn3-203ENSMUST00000093490 AdnpQ9Z103 1108 aaKnown RBP18.02■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ctage5Q8R311 779 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Dync1i1O88485 628 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Gm12185Q5NCB2 835 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms