RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Dnm1P39053 867 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Amotl1Q9D4H4 968 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Gm1043A0A140LJC2 1431 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Sun3Q5SS91 320 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Rbm19Q8R3C6 952 aaKnown RBP13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Crocc2F6XLV1 1638 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Phlpp2Q8BXA7 1320 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Snx25Q3ZT31 840 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Hand2Q61039 217 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Map3k2Q61083 619 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Ttc21bQ0HA38 1315 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 WtapQ9ER69 396 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Mx2Q9WVP9 655 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Zfp213E9QAW0 468 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Zbtb43Q9DAI4 467 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Rsrc1Q9DBU6 334 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 Ublcp1Q8BGR9 318 aa13.54□□□□□ -0.24
Trim56-201ENSMUST00000054384 4933428M09RikQ9D3X3 192 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Pet2A2AHY8 747 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Cwc25Q9DBF7 416 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Il16O54824 1322 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Kif5bQ61768 963 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Tpd52l2Q9CYZ2 220 aaKnown RBP13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Slc52a2Q9D8F3 450 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 AmfrQ9R049 643 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Armc9Q9D2I5 817 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Fam135aQ6NS59 1506 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Gm21985Q6P6P5 1106 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Slc14a2Q8R4T9 930 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 Ankrd24Q80VM7 985 aa13.53□□□□□ -0.24
Trim56-201ENSMUST00000054384 RarsQ9D0I9 660 aaKnown RBP13.52□□□□□ -0.24
Trim56-201ENSMUST00000054384 Speer3W4VSP1 261 aa13.52□□□□□ -0.24
Trim56-201ENSMUST00000054384 Cnnm2Q3TWN3 875 aa13.52□□□□□ -0.24
Trim56-201ENSMUST00000054384 Gm10378F6XQQ1 160 aa13.52□□□□□ -0.24
Trim56-201ENSMUST00000054384 Stmn2P55821 179 aa13.52□□□□□ -0.24
Trim56-201ENSMUST00000054384 Tbc1d32Q3URV1 1296 aa13.52□□□□□ -0.24
Trim56-201ENSMUST00000054384 Eif4g1Q6NZJ6 1600 aaKnown RBP13.52□□□□□ -0.24
Trim56-201ENSMUST00000054384 Plekhg2Q6KAU7 1340 aa13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 Eftud2O08810 971 aaKnown RBP13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 Slf2Q6P9P0 1278 aa13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 Nop56Q9D6Z1 580 aaKnown RBP13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 Pde4dQ01063 747 aa13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 Asic1Q6NXK8 526 aa13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 Tsga10Q6NY15 697 aa13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 Myd88P22366 296 aa13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 GphnQ8BUV3 769 aaKnown RBP13.52□□□□□ -0.25
Trim56-201ENSMUST00000054384 Gm45140A0A0N4SUM8 220 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Afap1Q80YS6 731 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Dync1i1O88485 628 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Chmp6P0C0A3 200 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Gsta4P24472 222 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Calcoco1Q8CGU1 691 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Zbtb3Q91X45 518 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Ubxn1Q922Y1 297 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Hs6st3Q9QYK4 470 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Kif5cP28738 956 aaKnown RBP13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Agbl1Q09M05 972 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 U2af1l4Q8BGJ9 220 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 ParvgQ9ERD8 331 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Tldc2A2ACG1 198 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Gpr161B2RPY5 545 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Eef1dP57776 281 aaKnown RBP13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Ankrd49Q8VE42 238 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Ccdc94Q9D6J3 314 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Tnip1Q9WUU8 647 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 P4ha1Q60715 534 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 GptQ8QZR5 496 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 SncbQ91ZZ3 133 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Riok3Q9DBU3 519 aaKnown RBP13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Zfpm1O35615 995 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Map3k9Q3U1V8 1077 aa13.51□□□□□ -0.25
Trim56-201ENSMUST00000054384 Ccdc25Q78PG9 208 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 DlatQ8BMF4 642 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Cnot6lQ8VEG6 555 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Myo1bP46735 1107 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Rassf2Q8BMS9 326 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 PaskQ8CEE6 1383 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Capza3P70190 299 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Ncf1Q09014 390 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Kiaa1328Q6NZK5 612 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 LlphQ9D945 130 aaKnown RBP13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Ppfia1B2RXQ2 1266 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Atp6v0a2P15920 856 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Plagl1Q9JLQ4 704 aa13.5□□□□□ -0.25
Trim56-201ENSMUST00000054384 Rad50P70388 1312 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Plekho1Q9JIY0 408 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Eps15P42567 897 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Mcm10Q0VBD2 885 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Igbp1Q61249 340 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Krt77Q6IFZ6 572 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Luc7l2Q7TNC4 392 aaKnown RBP13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Ccdc186Q8C9S4 917 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Capn12Q9ER56 720 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Sbno1Q689Z5 1390 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 PrphP15331 475 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Tcerg1lQ3B807 590 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Jade3Q6IE82 823 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Ints8Q80V86 995 aa13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Nol11Q8BJW5 723 aaKnown RBP13.49□□□□□ -0.25
Trim56-201ENSMUST00000054384 Asic3Q6X1Y6 530 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms