RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Cavin1O54724 392 aa21.82■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Prl7a2O54831 253 aa21.82■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Rnf20Q5DTM8 973 aa21.82■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Mb21d2Q8C525 428 aa21.82■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Unc13bQ9Z1N9 1602 aa21.81■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Hmx1O70218 332 aa21.81■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 ZwintQ9CQU5 252 aa21.81■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Ubr2Q6WKZ8 1755 aa21.81■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Tyro3P55144 880 aa21.81■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Lmbrd2Q8C561 694 aa21.81■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Plcd1Q8R3B1 756 aa21.81■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Ppp6r1Q7TSI3 856 aa21.8■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Rhot2Q8JZN7 620 aa21.8■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Cep57l1Q8VDS7 400 aa21.8■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Timm10P62073 90 aa21.8■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Oxsr1Q6P9R2 527 aa21.8■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Zfp317Q8C0Q5 607 aa21.8■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Stat1P42225 749 aa21.79■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Ano1Q8BHY3 960 aa21.79■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Nek11Q8C0Q4 628 aa21.79■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 PdcQ9QW08 244 aa21.79■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 CebpzP53569 1052 aaKnown RBP21.79■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Tmem87bQ8BKU8 555 aa21.79■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Efcab2Q9CQ46 164 aa21.79■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Irgm2A0A140LIF8 407 aa21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Zkscan7E9PVW1 718 aa21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Fkbp5Q64378 456 aa21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Ptcd1Q8C2E4 695 aaKnown RBP21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Rbm42Q91V81 474 aaKnown RBP21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Rrs1Q9CYH6 365 aaKnown RBP21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Syde2E9PUP1 1314 aa21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Kcna6Q61923 529 aa21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 RgmbQ7TQ33 436 aa21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Wdr33Q8K4P0 1330 aaKnown RBP21.78■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Rps6ka5Q8C050 863 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Usp44Q8C2S0 711 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Nrbp1Q99J45 535 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Wdr78E9PYY5 807 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Ccdc162pQ0VG85 912 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Usp28Q5I043 1051 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Atg9aQ68FE2 551 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Golim4Q8BXA1 655 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Hmg20bQ9Z104 317 aa21.77■■□□□ 1.08
Ccdc3-201ENSMUST00000027988 Mctp1E9PV86 951 aa21.76■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ltv1Q6NSQ7 470 aaKnown RBP21.76■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Cyp2d34L7N463 504 aa21.76■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 TnmdQ9EP64 317 aa21.76■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Atp8b3Q6UQ17 1335 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ppp1r10Q80W00 888 aaKnown RBP21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Iffo2Q8R2V2 512 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 1700113H08RikE9Q9Q5 327 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Sult6b1P0CC03 303 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Card10P58660 1021 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Gnat3Q3V3I2 354 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Rassf8Q8CJ96 419 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Bmp2kQ91Z96 1138 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ank1Q02357 1862 aa21.75■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Tbc1d4Q8BYJ6 1307 aa21.74■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Cct2P80314 535 aaKnown RBP21.74■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Nxf7Q80SZ6 620 aaKnown RBP21.74■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 ZyxQ62523 564 aa21.74■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Krt85Q9Z2T6 507 aa21.74■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Gm21663A0A0G2JE01 267 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Gm7361D3Z6R1 267 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 5031410I06RikE9Q4E0 267 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Gm1979E9QAN3 267 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Gm5862K7N5V5 267 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Gm10220K7N660 267 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ccdc158Q8CDI6 1109 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Srgap1Q91Z69 1062 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Abca15E9PWH4 1668 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 EzrP26040 586 aaKnown RBP21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Zbtb40Q6PCS8 1258 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Bicd2Q921C5 820 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Speer4bQ9D9F7 267 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ltb4r2Q9JJL9 360 aa21.73■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ankle2Q6P1H6 964 aa21.72■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Rbm17Q8JZX4 405 aaKnown RBP21.72■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Pcdhb15Q91Y04 786 aa21.72■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 PhaxQ9JJT9 385 aaKnown RBP21.72■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Csrnp1P59054 583 aa21.71■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ddx58Q6Q899 926 aa21.71■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ints5Q8CHT3 1018 aa21.71■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Sh3bp5Q9Z131 463 aa21.71■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 FocadA2AKG8 1798 aa21.71■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Ano6Q6P9J9 911 aa21.71■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Trim56Q80VI1 734 aaKnown RBP21.71■■□□□ 1.07
Ccdc3-201ENSMUST00000027988 Gpatch11Q3UFS4 262 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Slc5a1Q8C3K6 665 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Shisa4Q8CA71 197 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Kcnq3Q8K3F6 873 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Tmc2Q8R4P4 888 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Nrxn3Q6P9K9 1571 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Wnk3Q80XP9 1757 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Prl3d3A0A0M6L0J6 224 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Cfap157Q0VFX2 523 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Igflr1Q3U4N7 345 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Morc2aQ69ZX6 1030 aa21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 MlecQ6ZQI3 291 aaKnown RBP21.7■■□□□ 1.06
Ccdc3-201ENSMUST00000027988 Ttc27Q8CD92 847 aa21.7■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms