RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 TRAPPC4Q9Y296 219 aa11.9□□□□□ -0.5
CSNK1D-219ENST00000581660 TIMM22Q9Y584 194 aa11.9□□□□□ -0.5
CSNK1D-219ENST00000581660 MMP24Q9Y5R2 645 aa11.9□□□□□ -0.5
CSNK1D-219ENST00000581660 NPIPB8E9PQR5 432 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 CLDN34H7C241 214 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 PLPP2O43688 288 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 SYNGR3O43761 229 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 TBX19O60806 448 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 RP2O75695 350 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 SUPT7LO94864 414 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 MPZL1O95297 269 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 TFPIP10646 304 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 CDH2P19022 906 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 GATA3P23771 443 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 FKBP2P26885 142 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 APOBEC1P41238 236 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 UBE2NP61088 152 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 SPDYAQ5MJ70 313 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 ZNF678Q5SXM1 525 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 ABHD12BQ7Z5M8 362 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 C22orf15Q8WYQ4 148 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 BCL2L2Q92843 193 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 YIPF5Q969M3 257 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 THUMPD3Q9BV44 507 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 CCDC106Q9BWC9 280 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 ZNF416Q9BWM5 594 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 ZNF665Q9H7R5 613 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 REV1Q9UBZ9 1251 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 ZNF180Q9UJW8 692 aa11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 POLR3HQ9Y535 204 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-219ENST00000581660 A0A087WUV0 522 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 M0R233 179 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 PIP5K1BO14986 540 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 ANKRD28O15084 1053 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 EIF1BO60739 113 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 DEAF1O75398 565 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 HMGN2P05204 90 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 GSNP06396 782 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 FOXA1P55317 472 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 DCST2Q5T1A1 773 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 DCAF12L2Q5VW00 463 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 ANKRD26P1Q6NSI1 321 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 NOXRED1Q6NXP6 359 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 MYPOPQ86VE0 399 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 CNPY4Q8N129 248 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 ZIC4Q8N9L1 334 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 FAM120BQ96EK7 910 aaKnown RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 EGLN2Q96KS0 407 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 NELFAQ9H3P2 528 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 MS4A5Q9H3V2 200 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 PDP1Q9P0J1 537 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 STK38LQ9Y2H1 464 aa11.88□□□□□ -0.51
CSNK1D-219ENST00000581660 EXOC1LA0A1B0GW35 172 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 OR6C65A6NJZ3 312 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 LGI1O95970 557 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 CELA3BP08861 270 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 SNRPAP09012 282 aaKnown RBP11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 PKNOX1P55347 436 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 PDE7AQ13946 482 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 LASP1Q14847 261 aaKnown RBP11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 ZNF385BQ569K4 471 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 ZNF311Q5JNZ3 666 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 ZNF614Q8N883 585 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 RAB39BQ96DA2 213 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 DUX5Q96PT3 197 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 OR11A1Q9GZK7 315 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 NMUR2Q9GZQ4 415 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 PIF1Q9H611 641 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 CTPS2Q9NRF8 586 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 SIRT3Q9NTG7 399 aaPredicted RBP11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 TMEM181Q9P2C4 612 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 CMAHPQ9Y471 501 aa11.87□□□□□ -0.51
CSNK1D-219ENST00000581660 ZNF587BE7ETH6 402 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 NR5A2O00482 541 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 CBR1P16152 277 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 MDKP21741 143 aaPredicted RBP11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 OR2B6P58173 313 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 TUBA1BP68363 451 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 TUBA4AP68366 448 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 SLC35A1P78382 337 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 LCP2Q13094 533 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 SNTB2Q13425 540 aaKnown RBP11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 DAG1Q14118 895 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 MSMPQ1L6U9 139 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 PDZK1Q5T2W1 519 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 SAXO2Q658L1 398 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 TUBA1AQ71U36 451 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 AAED1Q7RTV5 226 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 GRINAQ7Z429 371 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 TRIM46Q7Z4K8 759 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 ADGRG3Q86Y34 549 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 IL17RDQ8NFM7 739 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 WFDC12Q8WWY7 111 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 SLC25A28Q96A46 364 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 PPCDCQ96CD2 204 aa11.86□□□□□ -0.51
CSNK1D-219ENST00000581660 METTL2AQ96IZ6 378 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms