RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 USP9XQ93008 2570 aaPredicted RBP13.4□□□□□ -0.26
RNF4-210ENST00000508235 A0A087WUJ7 227 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 ZC3H12DA2A288 527 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 TRAPPC13A5PLN9 417 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 CPSF4LA6NMK7 179 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 SMAD9O15198 467 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 CHP2O43745 196 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 TPST2O60704 377 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 SMNDC1O75940 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
RNF4-210ENST00000508235 ZNF682O95780 498 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 SERPINA1P01009 418 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 CD8BP10966 210 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 FPR1P21462 350 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 GTF2E2P29084 291 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 SIRPAP78324 504 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 TFF3Q07654 80 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 RASGEF1BQ0VAM2 473 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 PDK3Q15120 406 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 NPTX1Q15818 432 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 SP5Q6BEB4 398 aaPredicted RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 PAQR6Q6TCH4 344 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 FKBP9P1Q75LS8 142 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 STK32CQ86UX6 486 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 KIF18BQ86Y91 864 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 RNF148Q8N7C7 305 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 RBM15BQ8NDT2 890 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 MFSD8Q8NHS3 518 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 ADAMTS16Q8TE57 1224 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 GEMIN6Q8WXD5 167 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 RNASE6Q93091 150 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 STARD4Q96DR4 205 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 MPP4Q96JB8 637 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 WFDC6Q9BQY6 131 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 PRR14Q9BWN1 585 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 GORASP2Q9H8Y8 452 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 FANCFQ9NPI8 374 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 EMC3Q9P0I2 261 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 KLHL13Q9P2N7 655 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 GMPR2Q9P2T1 348 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 CD300AQ9UGN4 299 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 EGFL7Q9UHF1 273 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 PROCRQ9UNN8 238 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 SAMD4AQ9UPU9 718 aaKnown RBP13.39□□□□□ -0.27
RNF4-210ENST00000508235 FLNCQ14315 2725 aa13.39□□□□□ -0.27
RNF4-210ENST00000508235 SPTBN1Q01082 2364 aaKnown RBP13.38□□□□□ -0.27
RNF4-210ENST00000508235 IGHV3-15A0A0B4J1V0 119 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 LIPT2A6NK58 231 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 ZNF724A8MTY0 619 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 GPR171O14626 319 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 NPIPB7O75200 414 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 YES1P07947 543 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 THRBP10828 461 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 IMPDH2P12268 514 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 NCK1P16333 377 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 TCN1P20061 433 aaPredicted RBP13.38□□□□□ -0.27
RNF4-210ENST00000508235 AGTR1P30556 359 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 CPOXP36551 454 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 CDH12P55289 794 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 TAS2R41P59536 307 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 H3F3AP84243 136 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 CEACAM7Q14002 265 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 MFSD13AQ14CX5 517 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 OR7A5Q15622 319 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 FXNQ16595 210 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 IFI44LQ53G44 452 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 ABLIM2Q6H8Q1 611 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 DEF8Q6ZN54 512 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 BTLAQ7Z6A9 289 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 OR4D11Q8NGI4 311 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 OR6S1Q8NH40 331 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 PSD2Q9BQI7 771 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 TMEM43Q9BTV4 400 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 BCO1Q9HAY6 547 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 PLSCR4Q9NRQ2 329 aa13.38□□□□□ -0.27
RNF4-210ENST00000508235 PRPF19Q9UMS4 504 aaKnown RBP13.38□□□□□ -0.27
RNF4-210ENST00000508235 TRAV36DV7A0A075B6V5 113 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 A8MXE2 369 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 OR5F1O95221 314 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 IFNW1P05000 195 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 T-ENOLP0DO92 83 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 COX6B1P14854 86 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 GRNP28799 593 aaKnown RBP13.37□□□□□ -0.27
RNF4-210ENST00000508235 UQCRC1P31930 480 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 RPS5P46782 204 aaKnown RBP13.37□□□□□ -0.27
RNF4-210ENST00000508235 OR1E2P47887 323 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 PCYT1AP49585 367 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 EGR4Q05215 589 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 OTUD3Q5T2D3 398 aaPredicted RBP13.37□□□□□ -0.27
RNF4-210ENST00000508235 FAM69AQ5T7M9 428 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 VWA1Q6PCB0 445 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 TTC33Q6PID6 262 aaPredicted RBP13.37□□□□□ -0.27
RNF4-210ENST00000508235 LINC00114Q6XXX2 140 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 RINLQ6ZS11 566 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 LUZP2Q86TE4 346 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 RBM45Q8IUH3 476 aaKnown RBP13.37□□□□□ -0.27
RNF4-210ENST00000508235 TUSC5Q8IXB3 177 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 DNAJA3Q96EY1 480 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 SPOCK3Q9BQ16 436 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 RBM24Q9BX46 236 aaKnown RBP13.37□□□□□ -0.27
RNF4-210ENST00000508235 SLC19A3Q9BZV2 496 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms