RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ARL14Q8N4G2 192 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 OR7G2Q8NG99 324 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 GOT1L1Q8NHS2 421 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-201ENST00000264555 RHBDD1Q8TEB9 315 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 ZNF486Q96H40 463 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-201ENST00000264555 S100A6P06703 90 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 RAB3AP20336 220 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 ITGB8P26012 769 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 VASPP50552 380 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-201ENST00000264555 ABHD17BQ5VST6 288 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 STEAP3Q658P3 488 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 VASNQ6EMK4 673 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 RSC1A1Q92681 617 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 NMNAT3Q96T66 252 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 SLC22A7Q9Y694 548 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 TMEM129A0AVI4 362 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 CDHR4A6H8M9 788 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 RAB40ALP0C0E4 278 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 CSNK2A1P68400 391 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-201ENST00000264555 DEFA5Q01523 94 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 C14orf28Q4W4Y0 310 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 TMEM215Q68D42 235 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 OPN5Q6U736 354 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 SERPINA12Q8IW75 414 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 ABHD4Q8TB40 342 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 RAB40AQ8WXH6 277 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 CNOT9Q92600 299 aaKnown RBP15.49■□□□□ 0.07
PHRF1-201ENST00000264555 SLC6A13Q9NSD5 602 aa15.49■□□□□ 0.07
PHRF1-201ENST00000264555 POLR2AP24928 1970 aaKnown RBP15.49■□□□□ 0.07
PHRF1-201ENST00000264555 TRAV36DV7A0A075B6V5 113 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 TSPAN4O14817 238 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 ARSBP15848 533 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 POU3F4P49335 361 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 DUSP8Q13202 625 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 GPR50Q13585 617 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 DUSP19Q8WTR2 217 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 FGF14Q92915 247 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 SENP5Q96HI0 755 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-201ENST00000264555 CHRM4P08173 479 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 CD1EP15812 388 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 POU3F1Q03052 451 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-201ENST00000264555 NOXA1Q86UR1 476 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 HMGCLL1Q8TB92 370 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 FOXRED1Q96CU9 486 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-201ENST00000264555 SFXN2Q96NB2 322 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 ARL6Q9H0F7 186 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 ZNF160Q9HCG1 818 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 TTC3P53804 2025 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 CER1O95813 267 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 CD22P20273 847 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 ANKRD53Q8N9V6 530 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 A0A1B0GVC2 190 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 A6NIN4 97 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 FGF17O60258 216 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 Q6ZNX1 250 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 OR5D14Q8NGL3 314 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 LOC102723532A0A0G2JNH3 316 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 PTCRAQ6ISU1 281 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-201ENST00000264555 SPAG16Q8N0X2 631 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 IL17RCQ8NAC3 791 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 CCL4L1Q8NHW4 92 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 DEDD2Q8WXF8 326 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 DPCDQ9BVM2 203 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-201ENST00000264555 PPIL3Q9H2H8 161 aaKnown RBP15.48■□□□□ 0.07
PHRF1-201ENST00000264555 OR51J1Q9H342 316 aa15.48■□□□□ 0.07
PHRF1-201ENST00000264555 FZD7O75084 574 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 PLATP00750 562 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 IGHG1P01857 330 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 OR8G3PP0DMU2 310 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 CEBPGP53567 150 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 PSPHP78330 225 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 DCDP81605 110 aaKnown RBP15.47■□□□□ 0.07
PHRF1-201ENST00000264555 P2RY14Q15391 338 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 RSU1Q15404 277 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 NKG7Q16617 165 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 NRARPQ7Z6K4 114 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 PATE1Q8WXA2 126 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 FAM71F1Q96KD3 344 aaPredicted RBP15.47■□□□□ 0.07
PHRF1-201ENST00000264555 NCDNQ9UBB6 729 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 SIT1Q9Y3P8 196 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 TMEM269A0A1B0GVZ9 245 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 RAB3DO95716 219 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 CD1CP29017 333 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 CSNK1A1P48729 337 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 AKR1D1P51857 326 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 SLC14A1Q13336 389 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 UBE2NLQ5JXB2 153 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 MSRB3Q8IXL7 192 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 OR2T35Q8NGX2 323 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 SLC41A2Q96JW4 573 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 NRIP3Q9NQ35 241 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 TMEM72A0PK05 275 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 MAN2A2P49641 1150 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 CTBP2P56545 445 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 TIAL1Q01085 375 aaKnown RBP eCLIP15.47■□□□□ 0.07
PHRF1-201ENST00000264555 EEF1A2Q05639 463 aaKnown RBP15.47■□□□□ 0.07
PHRF1-201ENST00000264555 PFN4Q8NHR9 129 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 SLC2A12Q8TD20 617 aa15.47■□□□□ 0.07
PHRF1-201ENST00000264555 LOC105369274A0A096LPK9 316 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms