RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Snrnp70Q62376 448 aaKnown RBP14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mfsd4aQ6PDC8 510 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 PigzQ8BTP0 560 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ccdc187Q8C5V8 958 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ttc36Q8VBW8 186 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Pex12Q8VC48 359 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr799Q8VGI7 311 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr572Q8VGZ3 318 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ash2lQ91X20 623 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Twsg1Q9EP52 222 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Dbf4Q9QZ41 663 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Pex14Q9R0A0 376 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Syt8Q9R0N6 395 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Vmn1r10W4VSP8 311 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ttc3O88196 1979 aaKnown RBP14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Papss2O88428 621 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gpr52P0C5J4 361 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Stard6P59096 233 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Nrsn1P97799 196 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mmp25Q3U435 615 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr744Q7TRM0 323 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Hs6st2Q80UW0 612 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zfp189Q8BKP2 608 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Chst8Q8BQ86 417 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ugt2a3Q8BWQ1 534 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Mfsd1Q9DC37 464 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Polg2Q9QZM2 459 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Trpm6Q8CIR4 2028 aa14.53□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Gpr155A2AWR3 868 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Prdm13E9PZZ1 754 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Ccl5P30882 91 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Arf3P61205 181 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Il15raQ60819 263 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Pon2Q62086 354 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 NovQ64299 354 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Rhbdd3Q8BP97 385 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr1351Q8VGU6 319 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Hsbp1Q9CQZ1 76 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Zfp68Q9Z116 606 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Igkv12-98A0A0G2JGF9 115 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 StomP54116 284 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Acta2P62737 377 aaKnown RBP14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Actg2P63268 376 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Tfb2mQ3TL26 396 aaKnown RBP14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Sgk494Q5SYL1 278 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Cdkn2dQ60773 166 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Bcas1Q80YN3 633 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Nedd4lQ8CFI0 1004 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Hrh4Q91ZY2 391 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Popdc3Q9ES81 291 aa14.52□□□□□ -0.08
Ccdc88b-201ENSMUST00000113440 Olfr31E9Q3K2 317 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ctla4P09793 223 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 CpoxP36552 443 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Npbwr1P49681 329 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 UbdP63072 162 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cnn2Q08093 305 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pon3Q62087 354 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Megf11Q80T91 1091 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Prr11Q8BHE0 368 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fbxl3Q8C4V4 428 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Crb3Q8QZT4 113 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr771Q8VFH6 317 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr815Q8VFU0 316 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tcam1Q99NB3 548 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fam96bQ9D187 163 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pmepa1Q9D7R2 260 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Sult1b1Q9QWG7 299 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Atad5Q4QY64 1826 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zfp964B2RR88 472 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 PrkcaP20444 672 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 IapP24822 559 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Hif3aQ0VBL6 662 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fam189a1Q6A044 515 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ccdc58Q8R3Q6 144 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr849Q8VFF6 312 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1395Q8VGD7 317 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr539Q8VGL9 319 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slco6d1Q9D5W6 683 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Srebf1Q9WTN3 1134 aa14.52□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cd209fD3Z1H5 274 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Btbd2E9PUS2 523 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zfp599E9PWP1 548 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1564K7N6V7 318 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 LpoQ5SW46 710 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 ChdhQ8BJ64 596 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ndrg4Q8BTG7 352 aaKnown RBP14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 H1fntQ8CJI4 398 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr120Q8VFQ2 330 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fmo4Q8VHG0 560 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Dnajc24Q91ZF0 196 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pink1Q99MQ3 580 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Hrasls5Q9CPX5 270 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cnot9Q9JKY0 299 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc22a21Q9WTN6 564 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cacna1dQ99246 2179 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1315-ps1A0A140LI66 314 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Btbd35f21A0A140T8Q5 498 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm17949A0A1B0GRV7 212 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1034A0A1L1ST14 310 aa14.51□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Btbd35f22J3QN64 498 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms