Protein–RNA interactions for Protein: Q9WTN3

Srebf1, Sterol regulatory element-binding protein 1, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf1Q9WTN3 Gm25239-201ENSMUST00000174915 86 ntBASIC37.1■■■■□ 3.53
Srebf1Q9WTN3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Srebf1Q9WTN3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Srebf1Q9WTN3 Gm15042-201ENSMUST00000120212 883 ntBASIC32.25■■■□□ 2.75
Srebf1Q9WTN3 Gm24109-201ENSMUST00000175489 103 ntBASIC32.21■■■□□ 2.75
Srebf1Q9WTN3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Srebf1Q9WTN3 Gm15045-201ENSMUST00000117359 883 ntBASIC31.47■■■□□ 2.63
Srebf1Q9WTN3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Srebf1Q9WTN3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Srebf1Q9WTN3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Srebf1Q9WTN3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Srebf1Q9WTN3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Srebf1Q9WTN3 Gm23366-201ENSMUST00000175022 89 ntBASIC31■■■□□ 2.55
Srebf1Q9WTN3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Srebf1Q9WTN3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Srebf1Q9WTN3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.12■■■□□ 2.41
Srebf1Q9WTN3 Psd-208ENSMUST00000224556 2034 ntBASIC30■■■□□ 2.39
Srebf1Q9WTN3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.85■■■□□ 2.37
Srebf1Q9WTN3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.85■■■□□ 2.37
Srebf1Q9WTN3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Srebf1Q9WTN3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Srebf1Q9WTN3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Srebf1Q9WTN3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Srebf1Q9WTN3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Srebf1Q9WTN3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Srebf1Q9WTN3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Srebf1Q9WTN3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.42■■■□□ 2.3
Srebf1Q9WTN3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Srebf1Q9WTN3 Gm25238-201ENSMUST00000174914 89 ntBASIC29.33■■■□□ 2.29
Srebf1Q9WTN3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.28■■■□□ 2.28
Srebf1Q9WTN3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Srebf1Q9WTN3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Srebf1Q9WTN3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Srebf1Q9WTN3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Srebf1Q9WTN3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
Srebf1Q9WTN3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Srebf1Q9WTN3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Srebf1Q9WTN3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
Srebf1Q9WTN3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.78■■■□□ 2.2
Srebf1Q9WTN3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Srebf1Q9WTN3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Srebf1Q9WTN3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Srebf1Q9WTN3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Srebf1Q9WTN3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
Srebf1Q9WTN3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Srebf1Q9WTN3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.53■■■□□ 2.16
Srebf1Q9WTN3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.49■■■□□ 2.15
Srebf1Q9WTN3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Srebf1Q9WTN3 Gm25262-201ENSMUST00000174934 133 ntBASIC28.26■■■□□ 2.11
Srebf1Q9WTN3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Srebf1Q9WTN3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.23■■■□□ 2.11
Srebf1Q9WTN3 Gm27325-201ENSMUST00000175467 74 ntBASIC28.23■■■□□ 2.11
Srebf1Q9WTN3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.15■■■□□ 2.1
Srebf1Q9WTN3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Srebf1Q9WTN3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Srebf1Q9WTN3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Srebf1Q9WTN3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Srebf1Q9WTN3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Srebf1Q9WTN3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.87■■■□□ 2.05
Srebf1Q9WTN3 Rab21-202ENSMUST00000218831 843 ntBASIC27.87■■■□□ 2.05
Srebf1Q9WTN3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.81■■■□□ 2.04
Srebf1Q9WTN3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Srebf1Q9WTN3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Srebf1Q9WTN3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Srebf1Q9WTN3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.72■■■□□ 2.03
Srebf1Q9WTN3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.67■■■□□ 2.02
Srebf1Q9WTN3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.67■■■□□ 2.02
Srebf1Q9WTN3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Srebf1Q9WTN3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Srebf1Q9WTN3 Gm26115-201ENSMUST00000175605 87 ntBASIC27.64■■■□□ 2.02
Srebf1Q9WTN3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Srebf1Q9WTN3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.53■■■□□ 2
Srebf1Q9WTN3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.52■■■□□ 2
Srebf1Q9WTN3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Srebf1Q9WTN3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Srebf1Q9WTN3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Srebf1Q9WTN3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Srebf1Q9WTN3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Srebf1Q9WTN3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Srebf1Q9WTN3 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.42■■□□□ 1.98
Srebf1Q9WTN3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.4■■□□□ 1.98
Srebf1Q9WTN3 Gm8109-201ENSMUST00000194076 746 ntBASIC27.4■■□□□ 1.98
Srebf1Q9WTN3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.4■■□□□ 1.98
Srebf1Q9WTN3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Srebf1Q9WTN3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.32■■□□□ 1.96
Srebf1Q9WTN3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Srebf1Q9WTN3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Srebf1Q9WTN3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
Srebf1Q9WTN3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.24■■□□□ 1.95
Srebf1Q9WTN3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Srebf1Q9WTN3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Srebf1Q9WTN3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Srebf1Q9WTN3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Srebf1Q9WTN3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Srebf1Q9WTN3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Srebf1Q9WTN3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Srebf1Q9WTN3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Srebf1Q9WTN3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Srebf1Q9WTN3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.95■■□□□ 1.9
Srebf1Q9WTN3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms