Protein–RNA interactions for Protein: Q8CJI4

H1fnt, Testis-specific H1 histone, mousemouse

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fntQ8CJI4 Gm25239-201ENSMUST00000174915 86 ntBASIC32.5■■■□□ 2.79
H1fntQ8CJI4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
H1fntQ8CJI4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
H1fntQ8CJI4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
H1fntQ8CJI4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
H1fntQ8CJI4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
H1fntQ8CJI4 Psd-208ENSMUST00000224556 2034 ntBASIC29.32■■■□□ 2.28
H1fntQ8CJI4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
H1fntQ8CJI4 Gm15042-201ENSMUST00000120212 883 ntBASIC29.07■■■□□ 2.24
H1fntQ8CJI4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
H1fntQ8CJI4 Gm15045-201ENSMUST00000117359 883 ntBASIC28.53■■■□□ 2.16
H1fntQ8CJI4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
H1fntQ8CJI4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.38■■■□□ 2.13
H1fntQ8CJI4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
H1fntQ8CJI4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
H1fntQ8CJI4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
H1fntQ8CJI4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
H1fntQ8CJI4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
H1fntQ8CJI4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
H1fntQ8CJI4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
H1fntQ8CJI4 Gm24109-201ENSMUST00000175489 103 ntBASIC27.86■■■□□ 2.05
H1fntQ8CJI4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
H1fntQ8CJI4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
H1fntQ8CJI4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
H1fntQ8CJI4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
H1fntQ8CJI4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
H1fntQ8CJI4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.57■■■□□ 2
H1fntQ8CJI4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
H1fntQ8CJI4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
H1fntQ8CJI4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.36■■□□□ 1.97
H1fntQ8CJI4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
H1fntQ8CJI4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
H1fntQ8CJI4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
H1fntQ8CJI4 Gm23366-201ENSMUST00000175022 89 ntBASIC27.25■■□□□ 1.95
H1fntQ8CJI4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
H1fntQ8CJI4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
H1fntQ8CJI4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
H1fntQ8CJI4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
H1fntQ8CJI4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
H1fntQ8CJI4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
H1fntQ8CJI4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.9■■□□□ 1.9
H1fntQ8CJI4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.88■■□□□ 1.89
H1fntQ8CJI4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
H1fntQ8CJI4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
H1fntQ8CJI4 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.79■■□□□ 1.88
H1fntQ8CJI4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
H1fntQ8CJI4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
H1fntQ8CJI4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.69■■□□□ 1.86
H1fntQ8CJI4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
H1fntQ8CJI4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
H1fntQ8CJI4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
H1fntQ8CJI4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
H1fntQ8CJI4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.22■■□□□ 1.79
H1fntQ8CJI4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
H1fntQ8CJI4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
H1fntQ8CJI4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.14■■□□□ 1.78
H1fntQ8CJI4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
H1fntQ8CJI4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
H1fntQ8CJI4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
H1fntQ8CJI4 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.98■■□□□ 1.75
H1fntQ8CJI4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
H1fntQ8CJI4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
H1fntQ8CJI4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
H1fntQ8CJI4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
H1fntQ8CJI4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
H1fntQ8CJI4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
H1fntQ8CJI4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
H1fntQ8CJI4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
H1fntQ8CJI4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
H1fntQ8CJI4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
H1fntQ8CJI4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.71■■□□□ 1.71
H1fntQ8CJI4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
H1fntQ8CJI4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
H1fntQ8CJI4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
H1fntQ8CJI4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.68■■□□□ 1.7
H1fntQ8CJI4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
H1fntQ8CJI4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
H1fntQ8CJI4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
H1fntQ8CJI4 Gm27325-201ENSMUST00000175467 74 ntBASIC25.59■■□□□ 1.69
H1fntQ8CJI4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
H1fntQ8CJI4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
H1fntQ8CJI4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
H1fntQ8CJI4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
H1fntQ8CJI4 Gm25238-201ENSMUST00000174914 89 ntBASIC25.43■■□□□ 1.66
H1fntQ8CJI4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
H1fntQ8CJI4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
H1fntQ8CJI4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
H1fntQ8CJI4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
H1fntQ8CJI4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
H1fntQ8CJI4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
H1fntQ8CJI4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.34■■□□□ 1.65
H1fntQ8CJI4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
H1fntQ8CJI4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
H1fntQ8CJI4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.28■■□□□ 1.64
H1fntQ8CJI4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
H1fntQ8CJI4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
H1fntQ8CJI4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
H1fntQ8CJI4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
H1fntQ8CJI4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
H1fntQ8CJI4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.17■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 447.9 ms