RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 FFAR1O14842 300 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 LYPD3O95274 346 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 STAMBPO95630 424 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 IFNW1P05000 195 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 SHC1P29353 583 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 APOBEC1P41238 236 aaKnown RBP16.76■□□□□ 0.27
PNKP-224ENST00000631020 CLDN15P56746 228 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 PIN1Q13526 163 aaPredicted RBP16.76■□□□□ 0.27
PNKP-224ENST00000631020 C1orf146Q5VVC0 180 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 AAGABQ6PD74 315 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 ATG4DQ86TL0 474 aaPredicted RBP16.76■□□□□ 0.27
PNKP-224ENST00000631020 LILRB4Q8NHJ6 448 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 ADAMTS16Q8TE57 1224 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 TRIM15Q9C019 465 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 TMEM185BQ9H7F4 350 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 TMEM27Q9HBJ8 222 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 PNPLA3Q9NST1 481 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 NDUFAF4Q9P032 175 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 FBN2P35556 2912 aa16.76■□□□□ 0.27
PNKP-224ENST00000631020 TMED7-TICAM2A0A0A6YYA0 188 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 TCRBV3S1A0A5B6 114 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 H0YC42 278 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 LINC01387J3KSC0 135 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 hCG_2039718K7EN88 272 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 PEPDP12955 493 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 CCNA2P20248 432 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 HTR3AP46098 478 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 POLR2HP52434 150 aaKnown RBP16.75■□□□□ 0.27
PNKP-224ENST00000631020 SUCLG1P53597 346 aaKnown RBP16.75■□□□□ 0.27
PNKP-224ENST00000631020 CDH12P55289 794 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 TPD52P55327 224 aaPredicted RBP16.75■□□□□ 0.27
PNKP-224ENST00000631020 CLDN18P56856 261 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 CLDN20P56880 219 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 RAC1P63000 192 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ZNF613Q6PF04 617 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ULK3Q6PHR2 472 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 LURAP1LQ8IV03 231 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ADGRG5Q8IZF4 528 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 LILRA2Q8N149 483 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ATP6V1C2Q8NEY4 427 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 CANT1Q8WVQ1 401 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 WDYHV1Q96HA8 205 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 RPS6KB2Q9UBS0 482 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 A4GNTQ9UNA3 340 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 TMED7Q9Y3B3 224 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ENPP4Q9Y6X5 453 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 HCFC1P51610 2035 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ENO4A6NNW6 628 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 C19orf84I3L1E1 186 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 PRSS23O95084 383 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 GABRA1P14867 456 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ZNF708P17019 499 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ELK4P28324 431 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 CCNIQ14094 377 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ALG10BQ5I7T1 473 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 B3GNT6Q6ZMB0 384 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 SPATA24Q86W54 205 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 DNAJA4Q8WW22 397 aaPredicted RBP16.75■□□□□ 0.27
PNKP-224ENST00000631020 SLC38A4Q969I6 547 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 SLC47A1Q96FL8 570 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 IL1RAPQ9NPH3 570 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 CHRNA9Q9UGM1 479 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 RIMS3Q9UJD0 308 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ACAD8Q9UKU7 415 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 RNF6Q9Y252 685 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 AP4B1Q9Y6B7 739 aa16.75■□□□□ 0.27
PNKP-224ENST00000631020 ARHGAP21Q5T5U3 1957 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 TMEM72A0PK05 275 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 TRAPPC13A5PLN9 417 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 DIRAS1O95057 198 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 CPN1P15169 458 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 POU3F2P20265 443 aaPredicted RBP16.74■□□□□ 0.27
PNKP-224ENST00000631020 GCKP35557 465 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 NUP107P57740 925 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 PMPCAQ10713 525 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 BCL2A1Q16548 175 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 LINC00114Q6XXX2 140 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 WDR88Q6ZMY6 472 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 GGNQ86UU5 652 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 RPRMLQ8N4K4 120 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 OR5M9Q8NGP3 310 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 SMPDL3BQ92485 455 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 SLC41A3Q96GZ6 507 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 ZNF300Q96RE9 604 aaPredicted RBP16.74■□□□□ 0.27
PNKP-224ENST00000631020 PRSS27Q9BQR3 290 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 TTYH2Q9BSA4 534 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 MAGIXQ9H6Y5 334 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 SLC7A7Q9UM01 511 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 FAM215AQ9Y5M1 114 aa16.74■□□□□ 0.27
PNKP-224ENST00000631020 ZC3H12DA2A288 527 aaKnown RBP16.73■□□□□ 0.27
PNKP-224ENST00000631020 CIB2O75838 187 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 MT-ND1P03886 318 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 CXCR1P25024 350 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 SFTPDP35247 375 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 TAS2R41P59536 307 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 SRYQ05066 204 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 SELENBP1Q13228 472 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 CTU2Q2VPK5 515 aaKnown RBP16.73■□□□□ 0.27
PNKP-224ENST00000631020 TMEM176BQ3YBM2 270 aaPredicted RBP16.73■□□□□ 0.27
PNKP-224ENST00000631020 ZNF585AQ6P3V2 769 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms