RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SPATA3Q8NHX4 192 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 FBXO27Q8NI29 283 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 ST8SIA1Q92185 356 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 CPNE4Q96A23 557 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 S100PBPQ96BU1 408 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 TMEM19Q96HH6 336 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 KLHDC3Q9BQ90 382 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 TACO1Q9BSH4 297 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 NSRP1Q9H0G5 558 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 C12orf49Q9H741 205 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 SAR1AQ9NR31 198 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 LAMP3Q9UQV4 416 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 IFT52Q9Y366 437 aa15.59■□□□□ 0.09
SHKBP1-203ENST00000594298 TRBV5-3A0A0A0MS03 114 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 CENPVL1A0A0U1RR11 272 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 DNAJA2O60884 412 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 CRLF1O75462 422 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 UQCRBP14927 111 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 PRKCAP17252 672 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 GPX2P18283 190 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 KLF10Q13118 480 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 QPRTQ15274 297 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 MMEL1Q495T6 779 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 LIN52Q52LA3 116 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 RUNDC3AQ59EK9 446 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 SLC25A53Q5H9E4 307 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 COQ5Q5HYK3 327 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 GCNT6Q5T4J0 391 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 DLEU7Q6UYE1 221 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 CXXC5Q7LFL8 322 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 MSRB3Q8IXL7 192 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 ZNF440Q8IYI8 595 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 OR52P1PQ8NH57 321 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 LILRB1Q8NHL6 650 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 ZNF563Q8TA94 476 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 BBS10Q8TAM1 723 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 ABHD3Q8WU67 409 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 ROBO4Q8WZ75 1007 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 CGREF1Q99674 301 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 USB1Q9BQ65 265 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 BCL2L10Q9HD36 194 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 TIGARQ9NQ88 270 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 SERINC1Q9NRX5 453 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 KLHL13Q9P2N7 655 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 RNF115Q9Y4L5 304 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 PCNX3Q9H6A9 2034 aa15.58■□□□□ 0.08
SHKBP1-203ENST00000594298 JMJD1CQ15652 2540 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 BBIP1A8MTZ0 92 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 NPPAP01160 153 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 RPS4Y1P22090 263 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 SHC1P29353 583 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 FOXF1Q12946 379 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 CYLC2Q14093 348 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 CLEC12BQ2HXU8 276 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 TMEM201Q5SNT2 666 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 NCMAPQ5T1S8 102 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 SFRP5Q5T4F7 317 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 CPLX4Q7Z7G2 160 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 FAM71CQ8NEG0 241 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 C10orf82Q8WW14 230 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 HSD17B8Q92506 261 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 FBXW5Q969U6 566 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 TRMT61AQ96FX7 289 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 REXO5Q96IC2 774 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 ANKRD27Q96NW4 1050 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 SH3GL1Q99961 368 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 SRXN1Q9BYN0 137 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 QRSL1Q9H0R6 528 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 NGBQ9NPG2 151 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 CAPN7Q9Y6W3 813 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 DSPPQ9NZW4 1301 aa15.57■□□□□ 0.08
SHKBP1-203ENST00000594298 ETV2O00321 342 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 THBS1P07996 1170 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 NUDT7P0C024 238 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 DANCRP0C864 163 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 SLC6A2P23975 617 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 SFTPDP35247 375 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 HTR3AP46098 478 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 SELENBP1Q13228 472 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 P2RY6Q15077 328 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 MAPK11Q15759 364 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 TOMM34Q15785 309 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 REEP3Q6NUK4 255 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 NUFIP2Q7Z417 695 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 SPATA21Q7Z572 469 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 HMGN2P46Q86SG4 172 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 RETREG3Q86VR2 466 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 KRT73Q86Y46 540 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 TUSC5Q8IXB3 177 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 PCYOX1LQ8NBM8 494 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 ELAC2Q9BQ52 826 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 SPATA5L1Q9BVQ7 753 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 TMEM38AQ9H6F2 299 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 ESRP2Q9H6T0 727 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 ACER3Q9NUN7 267 aa15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 SPIN1Q9Y657 262 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-203ENST00000594298 GMNCA6NCL1 334 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 CFAP73A6NFT4 308 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 EFNA2O43921 213 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 PRKD3O94806 890 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms