RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ARMC10Q8N2F6 343 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 FAR1Q8WVX9 515 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 ZNF582Q96NG8 517 aaPredicted RBP12.56□□□□□ -0.4
TPM1-215ENST00000558868 IP6K3Q96PC2 410 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 CDCA4Q9BXL8 241 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 RTN4RQ9BZR6 473 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 AMBNQ9NP70 447 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 ACOT13Q9NPJ3 140 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 WDR70Q9NW82 654 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 GPR83Q9NYM4 423 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 PPP4R1LQ9P1A2 415 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 SPTBN2O15020 2390 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 IGLV3-32A0A0A0MS00 114 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 A0A1W2PNU3 283 aaPredicted RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 RIIAD1A6NNX1 92 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 STMND1H3BQB6 276 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 BHLHE40O14503 412 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 MAN1A2O60476 641 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 ZNF354AO60765 605 aaPredicted RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 TRMUO75648 421 aaKnown RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 FADS2O95864 444 aaKnown RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 CH25HO95992 272 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 HIST1H2ABP04908 130 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 STSP08842 583 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 DBTP11182 482 aaKnown RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 HK1P19367 917 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 DLSTP36957 453 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 ST13P50502 369 aaKnown RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 MAP2K6P52564 334 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 GAS1P54826 345 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 ZNF91Q05481 1191 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 CHAF1BQ13112 559 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 TMED1Q13445 227 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 ZNF791Q3KP31 576 aaPredicted RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 UBE2UQ5VVX9 321 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 RNLSQ5VYX0 342 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 GTF2IRD2BQ6EKJ0 949 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 ARHGAP11AQ6P4F7 1023 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 CCDC81Q6ZN84 652 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 HIST3H2AQ7L7L0 130 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 GTF2IRD2Q86UP8 949 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 RPS19BP1Q86WX3 136 aaKnown RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 GID4Q8IVV7 300 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 C10orf53Q8N6V4 93 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 ANKK1Q8NFD2 765 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 OR51A7Q8NH64 312 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 STK35Q8TDR2 534 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 ASB15Q8WXK1 588 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 FGF11Q92914 225 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 HIST1H2ACQ93077 130 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 TMEM80Q96HE8 168 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 TNFRSF13CQ96RJ3 184 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 LHPPQ9H008 270 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 MCCC2Q9HCC0 563 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 CPNE5Q9HCH3 593 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 MRPS18AQ9NVS2 196 aaKnown RBP12.55□□□□□ -0.4
TPM1-215ENST00000558868 KLHL21Q9UJP4 597 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 OSGIN1Q9UJX0 560 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 SLC6A5Q9Y345 797 aa12.55□□□□□ -0.4
TPM1-215ENST00000558868 IGKV1D-42A0A075B6H8 117 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 TRAV36DV7A0A075B6V5 113 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 TRAV27A0A087WT01 109 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 TMED7-TICAM2A0A0A6YYA0 188 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.54□□□□□ -0.4
TPM1-215ENST00000558868 IDH3BO43837 385 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 MT-ATP6P00846 226 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 SERPINA7P05543 415 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 PEPDP12955 493 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 PAICSP22234 425 aaKnown RBP12.54□□□□□ -0.4
TPM1-215ENST00000558868 MST1P26927 711 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 DCKP27707 260 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 RBMS1P29558 406 aaKnown RBP12.54□□□□□ -0.4
TPM1-215ENST00000558868 SOX3P41225 446 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
TPM1-215ENST00000558868 MAP2K4P45985 399 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 TMBIM6P55061 237 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 DLX5P56178 289 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 MLF1P58340 268 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 RPS18P62269 152 aaKnown RBP12.54□□□□□ -0.4
TPM1-215ENST00000558868 RAB40BQ12829 278 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 ZNF74Q16587 644 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 ARMC4Q5T2S8 1044 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 SYT6Q5T7P8 510 aaPredicted RBP12.54□□□□□ -0.4
TPM1-215ENST00000558868 NXNL2Q5VZ03 156 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 DPY19L2P2Q6ZN68 376 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 SLC46A3Q7Z3Q1 461 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 GPALPP1Q8IXQ4 340 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 OR10G3Q8NGC4 313 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 OR6S1Q8NH40 331 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 BCL7BQ9BQE9 202 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 RHNO1Q9BSD3 238 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 RACGAP1Q9H0H5 632 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 CDCP1Q9H5V8 836 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 FKRPQ9H9S5 495 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 NANSQ9NR45 359 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 CMC2Q9NRP2 79 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 CHCHD3Q9NX63 227 aaKnown RBP12.54□□□□□ -0.4
TPM1-215ENST00000558868 WARS2Q9UGM6 360 aaKnown RBP12.54□□□□□ -0.4
TPM1-215ENST00000558868 ZNF229Q9UJW7 825 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms