RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 FBXO48Q5FWF7 155 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 PIGGQ5H8A4 983 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 SPANXN3Q5MJ09 141 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 FAM45BPQ6NSW5 357 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 PLBD1Q6P4A8 553 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 TRIM40Q6P9F5 258 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 CCDC137Q6PK04 289 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 DGAT2L6Q6ZPD8 337 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 LINGO2Q7L985 606 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 CNTN4Q8IWV2 1026 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 OR4N5Q8IXE1 308 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 C9orf40Q8IXQ3 194 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 ZDHHC23Q8IYP9 409 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 CIARTQ8N365 385 aaPredicted RBP4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 LRRC25Q8N386 305 aaPredicted RBP4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 LIX1Q8N485 282 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 OR10G3Q8NGC4 313 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 OR5L2Q8NGL0 311 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 OR8K3Q8NH51 312 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 MOSPD2Q8NHP6 518 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 NEIL3Q8TAT5 605 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 FAM45AQ8TCE6 357 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 ZNF721Q8TF20 911 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 DPF1Q92782 380 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 SNAPC3Q92966 411 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 ANKRD9Q96BM1 317 aaPredicted RBP4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 OTULINQ96BN8 352 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 PPWD1Q96BP3 646 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 CERS2Q96G23 380 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 CFAP36Q96G28 342 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 PDLIM5Q96HC4 596 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 MAPKAP1Q9BPZ7 522 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 PIMREGQ9BSJ6 248 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 PCGF1Q9BSM1 259 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 AAMDCQ9H7C9 122 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 NT5DC2Q9H857 520 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 PLEKHF2Q9H8W4 249 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 PROK2Q9HC23 129 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 SH2D2AQ9NP31 389 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 COPS7AQ9UBW8 275 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 MTRF1LQ9UGC7 380 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 ZNF490Q9ULM2 529 aaPredicted RBP4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 CR1P17927 2039 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 ZANQ9Y493 2812 aa4.88□□□□□ -1.63
HNRNPC-233ENST00000557768 A0A1W2PPR1 153 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 SAP18O00422 153 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 VCYO14598 125 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 TAPBPO15533 448 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 FGF17O60258 216 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 PRKRAO75569 313 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 TRAPPC6AO75865 159 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ACSL3O95573 720 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 C1QAP02745 245 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 IGKV3-11P04433 115 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 STMN1P16949 149 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 CD22P20273 847 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ATP5A1P25705 553 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 TIMP3P35625 211 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 SLC6A12P48065 614 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 HNMTP50135 292 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 TAS2R39P59534 338 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 HERVK_113P63132 956 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ERVK-8P63133 956 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 FOXF2Q12947 444 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 SERTAD2Q14140 314 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 DOC2AQ14183 400 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 RCN2Q14257 317 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 PNLIPRP3Q17RR3 467 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ADPRMQ3LIE5 342 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 DCST1Q5T197 706 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 RNASEH2BQ5TBB1 312 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 DHRS7BQ6IAN0 325 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 TMEM64Q6YI46 380 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ZNF793Q6ZN11 406 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 FRA10AC1Q70Z53 315 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 LACC1Q8IV20 430 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 RASGEF1CQ8N431 466 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ACOT4Q8N9L9 421 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 SNX31Q8N9S9 440 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 RBM15BQ8NDT2 890 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 TTLQ8NG68 377 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 OSR1Q8TAX0 266 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 SLC22A8Q8TCC7 542 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 BCAS4Q8TDM0 211 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 PAQR8Q8TEZ7 354 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ANKRD49Q8WVL7 239 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ESAMQ96AP7 390 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 RHBDF1Q96CC6 855 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 MSI2Q96DH6 328 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 SPACA9Q96E40 222 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 SENP5Q96HI0 755 aaPredicted RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 GAL3ST4Q96RP7 486 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 WDR83Q9BRX9 315 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ERVK-6Q9BXR3 956 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 SLCO5A1Q9H2Y9 848 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 LYRM4Q9HD34 91 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 ACKR4Q9NPB9 350 aa4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 CHCHD3Q9NX63 227 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-233ENST00000557768 CNIH4Q9P003 139 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms