RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 G3V3Y1 287 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 TIMM8AO60220 97 aaPredicted RBP3.71□□□□□ -1.82
PABPN1-204ENST00000554062 ZG16O60844 167 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 IGHG4P01861 327 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 MMP11P24347 488 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 UGT1A5P35504 534 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 MAGEA8P43361 318 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 OR1D4P47884 311 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 FNTAP49354 379 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 BEX3Q00994 111 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 OGDHQ02218 1023 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 ASPHQ12797 758 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 ZNF154Q13106 437 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 HNRNPA0Q13151 305 aaKnown RBP3.71□□□□□ -1.82
PABPN1-204ENST00000554062 KRTAP24-1Q3LI83 254 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 C6orf226Q5I0X4 101 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 ARMC12Q5T9G4 340 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 LIPNQ5VXI9 398 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 TPGS2Q68CL5 300 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 H2BFWTQ7Z2G1 175 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 FAM228AQ86W67 206 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 EGFL6Q8IUX8 553 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 SLC22A9Q8IVM8 553 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 CADM2Q8N3J6 435 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 SUMF1Q8NBK3 374 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 MFSD9Q8NBP5 474 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 OR9A4Q8NGU2 314 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 BADQ92934 168 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 RAB3CQ96E17 227 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 CCDC28BQ9BUN5 200 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 TSSK1BQ9BXA7 367 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 METTL7AQ9H8H3 244 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 NHEJ1Q9H9Q4 299 aaPredicted RBP3.71□□□□□ -1.82
PABPN1-204ENST00000554062 MEPEQ9NQ76 525 aaPredicted RBP3.71□□□□□ -1.82
PABPN1-204ENST00000554062 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.71□□□□□ -1.82
PABPN1-204ENST00000554062 RAB20Q9NX57 234 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 SCML2Q9UQR0 700 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 POLDIP2Q9Y2S7 368 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 TIMM10BQ9Y5J6 103 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 PRSS21Q9Y6M0 314 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 MAP3K5Q99683 1374 aa3.71□□□□□ -1.82
PABPN1-204ENST00000554062 PPIAL4EA0A075B759 164 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 LRP5LA4QPB2 252 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 SAGE2PA6NJ88 616 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 RPL37AP8A6NKH3 93 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 ZNF716A6NP11 495 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 EFCAB7A8K855 629 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 PP2D1A8MPX8 630 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 E9PLD3 99 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 NBR2O15453 112 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 RS1O15537 224 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 PRKAB2O43741 272 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 CABYRO75952 493 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 AP2A1O95782 977 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 HPP00738 406 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 KRT14P02533 472 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 ALPIP09923 528 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 ZNF735P0CB33 412 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 PPIAL4FP0DN26 164 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 MAP3K8P41279 467 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 PLK1P53350 603 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 SEC61GP60059 68 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 CCNA1P78396 465 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 CHRNB3Q05901 458 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 KCNJ11Q14654 390 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 SLC10A1Q14973 349 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 SLC25A52Q3SY17 297 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 GLIPR1L2Q4G1C9 344 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 KLHL22Q53GT1 634 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 OTUD3Q5T2D3 398 aaPredicted RBP3.7□□□□□ -1.82
PABPN1-204ENST00000554062 STXBP4Q6ZWJ1 553 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 PRSS48Q7RTY5 328 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 CDR2LQ86X02 465 aaPredicted RBP3.7□□□□□ -1.82
PABPN1-204ENST00000554062 CSNK1A1LQ8N752 337 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 OR4Q3Q8NH05 313 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 TOMM40LQ969M1 308 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 CLCC1Q96S66 551 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 CHRDL1Q9BU40 450 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 SPATA16Q9BXB7 569 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 TRIM15Q9C019 465 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 RAB18Q9NP72 206 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 ZNF446Q9NWS9 450 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 SLC2A8Q9NY64 477 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 IL36GQ9NZH8 169 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 IKZF2Q9UKS7 526 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 PRPF19Q9UMS4 504 aaKnown RBP3.7□□□□□ -1.82
PABPN1-204ENST00000554062 PPIAL4AQ9Y536 164 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 RPAP1Q9BWH6 1393 aaPredicted RBP3.7□□□□□ -1.82
PABPN1-204ENST00000554062 UBR3Q6ZT12 1888 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 DOT1LQ8TEK3 1739 aa3.7□□□□□ -1.82
PABPN1-204ENST00000554062 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.69□□□□□ -1.82
PABPN1-204ENST00000554062 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.69□□□□□ -1.82
PABPN1-204ENST00000554062 KRTAP29-1A8MX34 341 aaPredicted RBP3.69□□□□□ -1.82
PABPN1-204ENST00000554062 FAM220BPB1ANY3 271 aa3.69□□□□□ -1.82
PABPN1-204ENST00000554062 E9PAM4 449 aa3.69□□□□□ -1.82
PABPN1-204ENST00000554062 H3BMQ9 156 aa3.69□□□□□ -1.82
PABPN1-204ENST00000554062 EFNA2O43921 213 aa3.69□□□□□ -1.82
PABPN1-204ENST00000554062 SRPX2O60687 465 aaPredicted RBP3.69□□□□□ -1.82
PABPN1-204ENST00000554062 ERLIN1O75477 346 aa3.69□□□□□ -1.82
PABPN1-204ENST00000554062 RENP00797 406 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms