RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 C1orf109Q9NX04 203 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 TMEM216Q9P0N5 145 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 CHRNA9Q9UGM1 479 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 TRAPPC4Q9Y296 219 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 FLVCR1Q9Y5Y0 555 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 ARFGEF3Q5TH69 2177 aa10.9□□□□□ -0.66
DDX41-215ENST00000512431 MGAM2Q2M2H8 2515 aa10.9□□□□□ -0.67
DDX41-215ENST00000512431 NPIPB9F8W1W9 429 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 SLC28A1O00337 649 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 TFP02787 698 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 UBTFL6P0CB48 400 aaPredicted RBP10.89□□□□□ -0.67
DDX41-215ENST00000512431 EFNA1P20827 205 aaPredicted RBP10.89□□□□□ -0.67
DDX41-215ENST00000512431 GPR6P46095 362 aaPredicted RBP10.89□□□□□ -0.67
DDX41-215ENST00000512431 CCT3P49368 545 aaKnown RBP10.89□□□□□ -0.67
DDX41-215ENST00000512431 SLC35A1P78382 337 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 C2orf54Q08AI8 447 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 SKP2Q13309 424 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 KIAA0040Q15053 153 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 EIF3MQ7L2H7 374 aaKnown RBP10.89□□□□□ -0.67
DDX41-215ENST00000512431 LCA5Q86VQ0 697 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 NUP37Q8NFH4 326 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 OR56A1Q8NGH5 318 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 MTERF3Q96E29 417 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 BOD1Q96IK1 185 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 CDC42EP4Q9H3Q1 356 aaKnown RBP10.89□□□□□ -0.67
DDX41-215ENST00000512431 ZNF442Q9H7R0 627 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 CTPS2Q9NRF8 586 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 NINJ2Q9NZG7 142 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 TMEM181Q9P2C4 612 aa10.89□□□□□ -0.67
DDX41-215ENST00000512431 TRAV20A0A0B4J274 112 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 LYNX1G3V0Z9 82 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 DNAJA2O60884 412 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 SKAP2O75563 359 aaPredicted RBP10.88□□□□□ -0.67
DDX41-215ENST00000512431 PNPP00491 289 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 SNRPAP09012 282 aaKnown RBP10.88□□□□□ -0.67
DDX41-215ENST00000512431 LYNX1P0DP58 116 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 ANPEPP15144 967 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 THBS4P35443 961 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 NAA20P61599 178 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 PDE7AQ13946 482 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 GPR68Q15743 365 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 C3orf36Q3SXR2 165 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 TBRG1Q3YBR2 411 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 AAED1Q7RTV5 226 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 GRINAQ7Z429 371 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 BPIFB2Q8N4F0 458 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 CLDND2Q8NHS1 167 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 CKAP2Q8WWK9 683 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 PMM1Q92871 262 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 CCDC126Q96EE4 140 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 SDF2Q99470 211 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 CCDC106Q9BWC9 280 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 NMUR2Q9GZQ4 415 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 GSTO2Q9H4Y5 243 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 NARFLQ9H6Q4 476 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 SIRT3Q9NTG7 399 aaPredicted RBP10.88□□□□□ -0.67
DDX41-215ENST00000512431 DDX28Q9NUL7 540 aaKnown RBP10.88□□□□□ -0.67
DDX41-215ENST00000512431 ZNF180Q9UJW8 692 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 KCNE3Q9Y6H6 103 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 TGP01266 2768 aa10.88□□□□□ -0.67
DDX41-215ENST00000512431 NPIPB8E9PQR5 432 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 ADRA2AP08913 450 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 CECR9P0C854 216 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 SAGP10523 405 aaPredicted RBP10.87□□□□□ -0.67
DDX41-215ENST00000512431 UROSP10746 265 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 SDC1P18827 310 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 CCNA2P20248 432 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 PRPH2P23942 346 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 ASMTP46597 345 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 H3F3AP84243 136 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 SLC17A1Q14916 467 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 ZNF141Q15928 474 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 REP15Q6BDI9 236 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 OR1K1Q8NGR3 316 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 CLHC1Q8NHS4 586 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 TMEM45BQ96B21 275 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 DDIT4LQ96D03 193 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 AURKBQ96GD4 344 aaPredicted RBP10.87□□□□□ -0.67
DDX41-215ENST00000512431 ZNF317Q96PQ6 595 aaPredicted RBP10.87□□□□□ -0.67
DDX41-215ENST00000512431 OR11A1Q9GZK7 315 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 TPK1Q9H3S4 243 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 SLC52A3Q9NQ40 469 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 BAIAP2L1Q9UHR4 511 aa10.87□□□□□ -0.67
DDX41-215ENST00000512431 ARPC4-TTLL3A0A0A6YYG9 625 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 DUXAA6NLW8 204 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 ZNF587BE7ETH6 402 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 STX11O75558 287 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 URI1O94763 535 aaPredicted RBP10.86□□□□□ -0.67
DDX41-215ENST00000512431 AK1P00568 194 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 GAAP10253 952 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 CALCRP30988 508 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 RYKP34925 604 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 HPCAL1P37235 193 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 RPL3P39023 403 aaKnown RBP10.86□□□□□ -0.67
DDX41-215ENST00000512431 HTR3AP46098 478 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 MYBPC1Q00872 1141 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 LSM12Q3MHD2 195 aaKnown RBP10.86□□□□□ -0.67
DDX41-215ENST00000512431 SLC9B1Q4ZJI4 515 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 ZNF311Q5JNZ3 666 aa10.86□□□□□ -0.67
DDX41-215ENST00000512431 CFAP157Q5JU67 520 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms