RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 PLPPR1Q8TBJ4 325 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ZNF473Q8WTR7 871 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 NUDCD2Q8WVJ2 157 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 TM9SF4Q92544 642 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 OMA1Q96E52 524 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ZBED6CLQ96FA7 236 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ATP5SQ99766 215 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 MCRIP2Q9BUT9 160 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 POTEKPQ9BYX7 375 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 UPF3AQ9H1J1 476 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 DEFB129Q9H1M3 183 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 CXXC4Q9H2H0 198 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 HIPK2Q9H2X6 1198 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 RNF41Q9H4P4 317 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 EBF3Q9H4W6 596 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 ARMC7Q9H6L4 198 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 TRIM45Q9H8W5 580 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 MED4Q9NPJ6 270 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 STMN3Q9NZ72 180 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 MRM2Q9UI43 246 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 AGO1Q9UL18 857 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 RAB23Q9ULC3 237 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 INSL6Q9Y581 213 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 V9GYY9 64 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 MAP3K5Q99683 1374 aa4.47□□□□□ -1.69
R3HDM1-216ENST00000483065 A0A087WZ39 114 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 IGHV2-70DA0A0C4DH43 119 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 FABP12A6NFH5 140 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 SAGE2PA6NJ88 616 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 GOLGA8JA6NMD2 632 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ERI2A8K979 691 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 F8VP50 259 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 H3BQV1 296 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 TM9SF1O15321 606 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 SYNGR3O43761 229 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 GMDSO60547 372 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 PFKFB2O60825 505 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ENTPD5O75356 428 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 DEXIO95424 95 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 CRYABP02511 175 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 RETP07949 1114 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 KRT16P08779 473 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 DPEP1P16444 411 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 SYT1P21579 422 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 CALML3P27482 149 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 IL12AP29459 219 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ACVR1BP36896 505 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 VHLP40337 213 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 OPRD1P41143 372 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 AQP2P41181 271 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ACTR1BP42025 376 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 BDKRB1P46663 353 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 YAP1P46937 504 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 QARSP47897 775 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ZFP36L2P47974 494 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 AMTP48728 403 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 CDH11P55287 796 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 OR2B6P58173 313 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 OC90Q02509 493 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 SIGLEC14Q08ET2 396 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ILF3Q12906 894 aaKnown RBP eCLIP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 SELENBP1Q13228 472 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 RIGQ13278 110 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 RAB35Q15286 201 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 SPATS1Q496A3 300 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 GTDC1Q4AE62 458 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 COQ5Q5HYK3 327 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 OR4C11Q6IEV9 310 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 FAM173BQ6P4H8 233 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 Q6ZVQ6 151 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ASB18Q6ZVZ8 466 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 MOB2Q70IA6 237 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 NIPA1Q7RTP0 329 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 FAM122BQ7Z309 247 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 PIWIL4Q7Z3Z4 852 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 PIGZQ86VD9 579 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 LIX1Q8N485 282 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 KIF2BQ8N4N8 673 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 DNAJC22Q8N4W6 341 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 OR2T12Q8NG77 320 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 LYPD6BQ8NI32 183 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 MPLKIPQ8TAP9 179 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 Q8TCH9 128 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 PHF10Q8WUB8 498 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 TCTEX1D2Q8WW35 142 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 HPSE2Q8WWQ2 592 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 NEDD4LQ96PU5 975 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 PAPOLGQ9BWT3 736 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 UCK2Q9BZX2 261 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ACTR3CQ9C0K3 210 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ASB8Q9H765 288 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 NMUR1Q9HB89 426 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 NECAP2Q9NVZ3 263 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 ELOVL2Q9NXB9 296 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 MSRB1Q9NZV6 116 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 EIF3KQ9UBQ5 218 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 UBQLN1Q9UMX0 589 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 SCML2Q9UQR0 700 aa4.46□□□□□ -1.7
R3HDM1-216ENST00000483065 VDAC3Q9Y277 283 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms