RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 BTCP35070 178 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 INPP1P49441 399 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 GBX2P52951 348 aaPredicted RBP11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 RPS7P62081 194 aaKnown RBP11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 CSTF1Q05048 431 aaKnown RBP11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 EFR3AQ14156 821 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 FZD2Q14332 565 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 CEP78Q5JTW2 689 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 MCATQ8IVS2 390 aaKnown RBP11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 YIPF7Q8N8F6 280 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 OR9A4Q8NGU2 314 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 OR5J2Q8NH18 312 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 TRMT10AQ8TBZ6 339 aaKnown RBP11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 GRHL3Q8TE85 626 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 GHSRQ92847 366 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 PELI1Q96FA3 418 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 MSANTD3Q96H12 275 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 PTCHD1Q96NR3 888 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 ERMAPQ96PL5 475 aaPredicted RBP11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 TBX5Q99593 518 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 Q9N2J8 555 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 FAM60AQ9NP50 221 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 EXOSC3Q9NQT5 275 aaKnown RBP11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 ING3Q9NXR8 418 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 COPZ2Q9P299 210 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 MSRAQ9UJ68 235 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 ZNF337Q9Y3M9 751 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 RNF215Q9Y6U7 377 aa11.5□□□□□ -0.57
ECHDC1-209ENST00000454591 SERINC4A6NH21 518 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 FZD7O75084 574 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 OR7A10O76100 309 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 TPPPO94811 219 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 CT45A8P0DMV1 189 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 CT45A9P0DMV2 189 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 TFPIP10646 304 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 EPXP11678 715 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 TYRP1P17643 537 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 GABRA4P48169 554 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 BLKP51451 505 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 AGFG1P52594 562 aaKnown RBP11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SLC25A1P53007 311 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 HSD17B7P56937 341 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 PRPS1P60891 318 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 RPS11P62280 158 aaKnown RBP eCLIP11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SIRPAP78324 504 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 PITPNAQ00169 270 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 HHEXQ03014 270 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 CRYZQ08257 329 aaKnown RBP11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 MAB21L1Q13394 359 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 CT45A2Q5DJT8 189 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 FNDC7Q5VTL7 733 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 ARMC6Q6NXE6 501 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SSX6Q7RTT6 188 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SLC35F2Q8IXU6 374 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SHISA5Q8N114 240 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 GHDCQ8N2G8 530 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SAMD12Q8N8I0 201 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 NPEPL1Q8NDH3 523 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 RCBTB1Q8NDN9 531 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 OR7G1Q8NGA0 311 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 UBASH3BQ8TF42 649 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 AKAP1Q92667 903 aaKnown RBP eCLIP11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 RIT1Q92963 219 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SCMH1Q96GD3 660 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 RBM18Q96H35 190 aaKnown RBP11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 ART5Q96L15 291 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 DMRTB1Q96MA1 342 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 NECTIN4Q96NY8 510 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 MRI1Q9BV20 369 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 TCEAL2Q9H3H9 227 aaPredicted RBP11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 PAQR5Q9NXK6 330 aaPredicted RBP11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 PTTG3PQ9NZH4 202 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 RPS6KB2Q9UBS0 482 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 FBXL4Q9UKA2 621 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 SPATA2Q9UM82 520 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 CACNG2Q9Y698 323 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 MAU2Q9Y6X3 613 aa11.49□□□□□ -0.57
ECHDC1-209ENST00000454591 COL5A1P20908 1838 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 TCRBV21S2A2A0A5A6 115 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 A8MV72 311 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 MCIDASD6RGH6 385 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 RFXAPO00287 272 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 HCRTR1O43613 425 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 TXNDC12O95881 172 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 MRPL3P09001 348 aaKnown RBP11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 CLUP10909 449 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 HIST1H1CP16403 213 aaKnown RBP11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 PTNP21246 168 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 LCN1P31025 176 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 PYCR1P32322 319 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 FASLGP48023 281 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 GDI2P50395 445 aaKnown RBP11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 SLC3A1Q07837 685 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 RIPPLY1Q0D2K3 151 aa11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 MRPL28Q13084 256 aaKnown RBP11.48□□□□□ -0.57
ECHDC1-209ENST00000454591 DYRK1AQ13627 763 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms