RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 TNFRSF13CQ96RJ3 184 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 GPR87Q9BY21 358 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 ADAM19Q9H013 955 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 ANKRD10Q9NXR5 420 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 SCN3BQ9NY72 215 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 GPR83Q9NYM4 423 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 SIGLEC7Q9Y286 467 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 TMEM5Q9Y2B1 443 aa11.1□□□□□ -0.63
SPTBN1-203ENST00000389980 C21orf140B9A014 251 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 H3BMQ9 156 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 SLC2A10O95528 541 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 HPP00738 406 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 PCYT1AP49585 367 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 GABARAPL2P60520 117 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 C17orf67Q0P5P2 114 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 FHL1Q13642 323 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF468Q5VIY5 522 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 OAFQ86UD1 273 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 ZNF420Q8TAQ5 688 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 ASB15Q8WXK1 588 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 OSTF1Q92882 214 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 COG8Q96MW5 612 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 DUSP21Q9H596 190 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 SLC25A19Q9HC21 320 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 HHATLQ9HCP6 504 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 OSGIN1Q9UJX0 560 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 YARS2Q9Y2Z4 477 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 TPRKBQ9Y3C4 175 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 SNX5Q9Y5X3 404 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 CHCHD2Q9Y6H1 151 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 FREM3P0C091 2139 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 INMTO95050 263 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 PNMTP11086 282 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 GP1BBP13224 206 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 CEACAM1P13688 526 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 TCEA1P23193 301 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 RBMS1P29558 406 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 CASP3P42574 277 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 MAP2K4P45985 399 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 SSR4P51571 173 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 MLF1P58340 268 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 C1QL3Q5VWW1 255 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 SMARCD3Q6STE5 483 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 ARSKQ6UWY0 536 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 OR13F1Q8NGS4 319 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 BRIX1Q8TDN6 353 aaKnown RBP11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 RNF138Q8WVD3 245 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 GGHQ92820 318 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 KTI12Q96EK9 354 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 SGTBQ96EQ0 304 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 UBQLN3Q9H347 655 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 CLN6Q9NWW5 311 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 TAS2R10Q9NYW0 307 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 VDAC3Q9Y277 283 aa11.09□□□□□ -0.63
SPTBN1-203ENST00000389980 A0A1W2PPW3 197 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 ZC3H12DA2A288 527 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 SHISA8B8ZZ34 492 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 PROB1E7EW31 1015 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 G3V3Y1 287 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 MPZL2O60487 215 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 PTP4A3O75365 173 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 MT-ND2P03891 347 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 ENDOUP21128 410 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 CXCR1P25024 350 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 DCKP27707 260 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 C21orf33P30042 268 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 SNRPGP62308 76 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 EFNB1P98172 346 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 PGGHGQ32M88 737 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC35F1Q5T1Q4 408 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC46A3Q7Z3Q1 461 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 ZBTB46Q86UZ6 589 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 IGFN1Q86VF2 1251 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 TMEM156Q8N614 296 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC15A4Q8N697 577 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 C10orf53Q8N6V4 93 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 OR2T33Q8NG76 320 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 NACC2Q96BF6 587 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 MOGAT1Q96PD6 335 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 POLDIP3Q9BY77 421 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 MCCC2Q9HCC0 563 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 PPP4R1LQ9P1A2 415 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 PSORS1C1Q9UIG5 152 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 B3GNT3Q9Y2A9 372 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 WIF1Q9Y5W5 379 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
SPTBN1-203ENST00000389980 FUOMA2VDF0 154 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 CLCA1A8K7I4 914 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 CDRT15L2A8MXV6 281 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 MAGEB3O15480 346 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 CCL3P10147 92 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 JUNBP17275 347 aaPredicted RBP11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 BMP7P18075 431 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 RPS5P46782 204 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 BCAP31P51572 246 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 ATP1A1-AS1Q5TC04 95 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 TMEM53Q6P2H8 277 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 OPN5Q6U736 354 aa11.07□□□□□ -0.64
SPTBN1-203ENST00000389980 CCDC81Q6ZN84 652 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms