RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 GRINAQ7Z429 371 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 ADGRG3Q86Y34 549 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 DEPDC4Q8N2C3 294 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 WDR31Q8NA23 367 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 OR52E4Q8NGH9 312 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 ZNF563Q8TA94 476 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 C10orf105Q8TEF2 133 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 OIT3Q8WWZ8 545 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 FAM168AQ92567 244 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 OR11A1Q9GZK7 315 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 SAP130Q9H0E3 1048 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 MANSC1Q9H8J5 431 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 ASIC5Q9NY37 505 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 WDR45Q9Y484 360 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 ANK2Q01484 3957 aa13.2□□□□□ -0.3
GDPD3-201ENST00000360688 PDLIM1O00151 329 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 GUSBP08236 651 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 FKBP2P26885 142 aaKnown RBP13.19□□□□□ -0.3
GDPD3-201ENST00000360688 CLK1P49759 484 aaKnown RBP13.19□□□□□ -0.3
GDPD3-201ENST00000360688 OR2B6P58173 313 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 H3F3AP84243 136 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 PLAURQ03405 335 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 EMX2Q04743 252 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 FUT5Q11128 374 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 MAD2L1Q13257 205 aaPredicted RBP13.19□□□□□ -0.3
GDPD3-201ENST00000360688 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
GDPD3-201ENST00000360688 OR4A15Q8NGL6 344 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 XAGE5Q8WWM1 108 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 RAB8BQ92930 207 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 ROPN1LQ96C74 230 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 ZG16BQ96DA0 208 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 BEX2Q9BXY8 128 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 AMBRA1Q9C0C7 1298 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 POLE3Q9NRF9 147 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 ARGLU1Q9NWB6 273 aaPredicted RBP13.19□□□□□ -0.3
GDPD3-201ENST00000360688 NOP53Q9NZM5 478 aaKnown RBP13.19□□□□□ -0.3
GDPD3-201ENST00000360688 TMEM181Q9P2C4 612 aa13.19□□□□□ -0.3
GDPD3-201ENST00000360688 CLDN24A6NM45 220 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 SCN2BO60939 215 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 AGR2O95994 175 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 F12P00748 615 aaPredicted RBP13.18□□□□□ -0.3
GDPD3-201ENST00000360688 IGHV4-31P0DP07 118 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 CCNA2P20248 432 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 MAGEA8P43361 318 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 EFNA4P52798 201 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 KCNJ10P78508 379 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 SLC25A3Q00325 362 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 MPP2Q14168 576 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 ATAD3BQ5T9A4 648 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 C9orf135Q5VTT2 229 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 CYB5R2Q6BCY4 276 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 TNFAIP8L2Q6P589 184 aaPredicted RBP13.18□□□□□ -0.3
GDPD3-201ENST00000360688 CASP12Q6UXS9 341 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 FRRS1Q6ZNA5 592 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 HMGN2P46Q86SG4 172 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 OR8J2Q8NGG1 315 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 PROX1Q92786 737 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 PKNOX2Q96KN3 472 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 KCNK9Q9NPC2 374 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 EXOSC3Q9NQT5 275 aaKnown RBP13.18□□□□□ -0.3
GDPD3-201ENST00000360688 SLC7A10Q9NS82 523 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 LPAR3Q9UBY5 353 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 DCTN4Q9UJW0 460 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 PCDHGB4Q9UN71 923 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 TRAPPC4Q9Y296 219 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 ATP23Q9Y6H3 246 aa13.18□□□□□ -0.3
GDPD3-201ENST00000360688 PRAMEF27A3QJZ7 478 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 LY6HO94772 140 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 CSF3P09919 207 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 ZNF16P17020 682 aaPredicted RBP13.17□□□□□ -0.3
GDPD3-201ENST00000360688 UQCRC2P22695 453 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 IDH2P48735 452 aaKnown RBP13.17□□□□□ -0.3
GDPD3-201ENST00000360688 PHC1P78364 1004 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 CHRNB3Q05901 458 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 CASP8Q14790 479 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 SMU1Q2TAY7 513 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 KRTAP24-1Q3LI83 254 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 ANKRD46Q86W74 232 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 ARFGAP2Q8N6H7 521 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 C1orf162Q8NEQ5 155 aaPredicted RBP13.17□□□□□ -0.3
GDPD3-201ENST00000360688 CNOT9Q92600 299 aaKnown RBP13.17□□□□□ -0.3
GDPD3-201ENST00000360688 SHARPINQ9H0F6 387 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 FKRPQ9H9S5 495 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 SLC17A5Q9NRA2 495 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.17□□□□□ -0.3
GDPD3-201ENST00000360688 PARPBPQ9NWS1 579 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 UPB1Q9UBR1 384 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 AMDHD2Q9Y303 409 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 FLVCR1Q9Y5Y0 555 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 PMF1-BGLAPU3KQ54 211 aa13.17□□□□□ -0.3
GDPD3-201ENST00000360688 TMED7-TICAM2A0A0A6YYA0 188 aa13.16□□□□□ -0.3
GDPD3-201ENST00000360688 AP3D1O14617 1153 aa13.16□□□□□ -0.3
GDPD3-201ENST00000360688 BIRC5O15392 142 aa13.16□□□□□ -0.3
GDPD3-201ENST00000360688 EIF1BO60739 113 aaKnown RBP13.16□□□□□ -0.3
GDPD3-201ENST00000360688 CPSF4O95639 269 aaKnown RBP13.16□□□□□ -0.3
GDPD3-201ENST00000360688 IMPDH2P12268 514 aa13.16□□□□□ -0.3
GDPD3-201ENST00000360688 BMP4P12644 408 aa13.16□□□□□ -0.3
GDPD3-201ENST00000360688 USF1P22415 310 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms