RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 SmsP97355 366 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Med22Q62276 200 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Smarcd3Q6P9Z1 483 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr298Q7TS06 332 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Krr1Q8BGA5 380 aaKnown RBP13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ncs1Q8BNY6 190 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Nmral1Q8K2T1 309 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Erlec1Q8VEH8 483 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Asb6Q91ZU1 418 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Acad8Q9D7B6 413 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Btnl10Q9JK39 275 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Serpini2Q9JK88 405 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Foxo1Q9R1E0 652 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Espl1P60330 2118 aa13.62□□□□□ -0.23
Nup88-202ENSMUST00000108530 Igkv12-44A0A140T8M2 115 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Krt83E9Q1Y9 479 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr521E9Q519 321 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Psmd4O35226 376 aaKnown RBP13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Mpzl2O70255 215 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Csf2P01587 141 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Gsta1P13745 223 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Kcne1P23299 129 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 NptnP97300 397 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ly6eQ64253 130 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Tmem158Q6F5E0 286 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Gsta1Q6P8Q0 223 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Med16Q6PGF3 828 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Pgr15lQ80T54 456 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Wdr92Q8BGF3 357 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Nipal3Q8BGN5 410 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Cstf2Q8BIQ5 580 aaKnown RBP13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Catsper4Q8BVN3 442 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Synpo2lQ8BWB1 975 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Unc119bQ8C4B4 251 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Vmn1r189Q8K3N3 312 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr672Q8VG28 312 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 P2ry12Q9CPV9 347 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Trim13Q9CYB0 407 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 MNCb-2990Q9JJ93 142 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Prl3c1Q9QUN5 212 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ulk2Q9QY01 1037 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Loxl3Q9Z175 754 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 RfxankQ9Z205 269 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 SvilQ8K4L3 2170 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Gm28557A0A087WQQ0 336 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Itga10E9Q6R1 1167 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Vmn1r12G5E8G1 307 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Clk4O35493 481 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Gabrg3P27681 467 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr6P34986 316 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Mtf1Q07243 675 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Tigd2Q0VBL1 525 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Sez6l2Q4V9Z5 910 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Olfr645Q7TRQ1 315 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Zar1Q80SU3 361 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Slc35f1Q8BGK5 408 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Enpp6Q8BGN3 440 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Mal2Q8BI08 175 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Prox2Q8BII1 593 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 CipcQ8R0W1 432 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Syngr3Q8R191 229 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Vsx1Q91V10 363 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Brinp1Q920P3 760 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Tmem9Q9CR23 183 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Cdca4Q9CWM2 237 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Cers4Q9D6J1 393 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Med8Q9D7W5 268 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 PgdQ9DCD0 483 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Pole3Q9JKP7 145 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Qtrt1Q9JMA2 403 aa13.61□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ints1Q6P4S8 2195 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Gm3636E9Q5P1 227 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Slc6a18O88576 615 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Polr1cP52432 346 aaKnown RBP13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Prss48Q14B25 312 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ankrd27Q3UMR0 1048 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Tnfaip3Q60769 775 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Poldip3Q8BG81 420 aaKnown RBP13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Fbxl14Q8BID8 400 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 A730049H05RikQ8C940 139 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Pdlim5Q8CI51 591 aaKnown RBP13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Slc31a1Q8K211 196 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ccdc59Q8R2N0 240 aaKnown RBP13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Znf24Q91VN1 368 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Mrgprb3Q91ZC1 312 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ptges3lQ9D9A7 131 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Q9DAD0 168 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 MioxQ9QXN5 285 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Slc22a21Q9WTN6 564 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Piezo1E2JF22 2547 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Exph5Q0VAV2 1960 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Adam3F8VQ03 822 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 A630095N17RikJ3KMM7 116 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Vmn2r45L7N2B5 852 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Capns1O88456 269 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 MpoP11247 718 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Ggta1P23336 394 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Hsd3b2P26149 373 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Pax4P32115 349 aa13.6□□□□□ -0.23
Nup88-202ENSMUST00000108530 Mmp12P34960 473 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms