Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 Gm25239-201ENSMUST00000174915 86 ntBASIC34.57■■■■□ 3.12
Nipal3Q8BGN5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Nipal3Q8BGN5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Nipal3Q8BGN5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Nipal3Q8BGN5 Gm15042-201ENSMUST00000120212 883 ntBASIC30.5■■■□□ 2.47
Nipal3Q8BGN5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Nipal3Q8BGN5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Nipal3Q8BGN5 Gm15045-201ENSMUST00000117359 883 ntBASIC29.84■■■□□ 2.37
Nipal3Q8BGN5 Gm24109-201ENSMUST00000175489 103 ntBASIC29.8■■■□□ 2.36
Nipal3Q8BGN5 Psd-208ENSMUST00000224556 2034 ntBASIC29.55■■■□□ 2.32
Nipal3Q8BGN5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Nipal3Q8BGN5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Nipal3Q8BGN5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Nipal3Q8BGN5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Nipal3Q8BGN5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Nipal3Q8BGN5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Nipal3Q8BGN5 Gm23366-201ENSMUST00000175022 89 ntBASIC28.92■■■□□ 2.22
Nipal3Q8BGN5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.82■■■□□ 2.2
Nipal3Q8BGN5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Nipal3Q8BGN5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Nipal3Q8BGN5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
Nipal3Q8BGN5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Nipal3Q8BGN5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Nipal3Q8BGN5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Nipal3Q8BGN5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Nipal3Q8BGN5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.12
Nipal3Q8BGN5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Nipal3Q8BGN5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Nipal3Q8BGN5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Nipal3Q8BGN5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Nipal3Q8BGN5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.1■■■□□ 2.09
Nipal3Q8BGN5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Nipal3Q8BGN5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Nipal3Q8BGN5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28■■■□□ 2.07
Nipal3Q8BGN5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Nipal3Q8BGN5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Nipal3Q8BGN5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.73■■■□□ 2.03
Nipal3Q8BGN5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Nipal3Q8BGN5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Nipal3Q8BGN5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.59■■■□□ 2.01
Nipal3Q8BGN5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Nipal3Q8BGN5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Nipal3Q8BGN5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.39■■□□□ 1.98
Nipal3Q8BGN5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Nipal3Q8BGN5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Nipal3Q8BGN5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Nipal3Q8BGN5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.23■■□□□ 1.95
Nipal3Q8BGN5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Nipal3Q8BGN5 Gm25238-201ENSMUST00000174914 89 ntBASIC27.18■■□□□ 1.94
Nipal3Q8BGN5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nipal3Q8BGN5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.16■■□□□ 1.94
Nipal3Q8BGN5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Nipal3Q8BGN5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.98■■□□□ 1.91
Nipal3Q8BGN5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Nipal3Q8BGN5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Nipal3Q8BGN5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Nipal3Q8BGN5 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.79■■□□□ 1.88
Nipal3Q8BGN5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Nipal3Q8BGN5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Nipal3Q8BGN5 Gm27325-201ENSMUST00000175467 74 ntBASIC26.75■■□□□ 1.87
Nipal3Q8BGN5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.73■■□□□ 1.87
Nipal3Q8BGN5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Nipal3Q8BGN5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Nipal3Q8BGN5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
Nipal3Q8BGN5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Nipal3Q8BGN5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.59■■□□□ 1.85
Nipal3Q8BGN5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.59■■□□□ 1.85
Nipal3Q8BGN5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Nipal3Q8BGN5 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.56■■□□□ 1.84
Nipal3Q8BGN5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Nipal3Q8BGN5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Nipal3Q8BGN5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
Nipal3Q8BGN5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Nipal3Q8BGN5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Nipal3Q8BGN5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Nipal3Q8BGN5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Nipal3Q8BGN5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nipal3Q8BGN5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.39■■□□□ 1.82
Nipal3Q8BGN5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.39■■□□□ 1.82
Nipal3Q8BGN5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nipal3Q8BGN5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nipal3Q8BGN5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nipal3Q8BGN5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.35■■□□□ 1.81
Nipal3Q8BGN5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nipal3Q8BGN5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
Nipal3Q8BGN5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Nipal3Q8BGN5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nipal3Q8BGN5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nipal3Q8BGN5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nipal3Q8BGN5 Rab21-202ENSMUST00000218831 843 ntBASIC26.1■■□□□ 1.77
Nipal3Q8BGN5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nipal3Q8BGN5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nipal3Q8BGN5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.09■■□□□ 1.77
Nipal3Q8BGN5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nipal3Q8BGN5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.98■■□□□ 1.75
Nipal3Q8BGN5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nipal3Q8BGN5 Gm25262-201ENSMUST00000174934 133 ntBASIC25.92■■□□□ 1.74
Nipal3Q8BGN5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nipal3Q8BGN5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Nipal3Q8BGN5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms