Protein–RNA interactions for Protein: Q8BWB1

Synpo2l, Synaptopodin 2-like protein, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo2lQ8BWB1 Gm25239-201ENSMUST00000174915 86 ntBASIC34.5■■■■□ 3.11
Synpo2lQ8BWB1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Synpo2lQ8BWB1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Synpo2lQ8BWB1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Synpo2lQ8BWB1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Synpo2lQ8BWB1 Gm15042-201ENSMUST00000120212 883 ntBASIC30.41■■■□□ 2.46
Synpo2lQ8BWB1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Synpo2lQ8BWB1 Gm15045-201ENSMUST00000117359 883 ntBASIC29.85■■■□□ 2.37
Synpo2lQ8BWB1 Gm24109-201ENSMUST00000175489 103 ntBASIC29.8■■■□□ 2.36
Synpo2lQ8BWB1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Synpo2lQ8BWB1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Synpo2lQ8BWB1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Synpo2lQ8BWB1 Psd-208ENSMUST00000224556 2034 ntBASIC28.97■■■□□ 2.23
Synpo2lQ8BWB1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.86■■■□□ 2.21
Synpo2lQ8BWB1 Gm23366-201ENSMUST00000175022 89 ntBASIC28.8■■■□□ 2.2
Synpo2lQ8BWB1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Synpo2lQ8BWB1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Synpo2lQ8BWB1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Synpo2lQ8BWB1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Synpo2lQ8BWB1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Synpo2lQ8BWB1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Synpo2lQ8BWB1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Synpo2lQ8BWB1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Synpo2lQ8BWB1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Synpo2lQ8BWB1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Synpo2lQ8BWB1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.17■■■□□ 2.1
Synpo2lQ8BWB1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Synpo2lQ8BWB1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Synpo2lQ8BWB1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Synpo2lQ8BWB1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Synpo2lQ8BWB1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.92■■■□□ 2.06
Synpo2lQ8BWB1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Synpo2lQ8BWB1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.75■■■□□ 2.03
Synpo2lQ8BWB1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Synpo2lQ8BWB1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.56■■■□□ 2
Synpo2lQ8BWB1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Synpo2lQ8BWB1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Synpo2lQ8BWB1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Synpo2lQ8BWB1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Synpo2lQ8BWB1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Synpo2lQ8BWB1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Synpo2lQ8BWB1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
Synpo2lQ8BWB1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.22■■□□□ 1.95
Synpo2lQ8BWB1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Synpo2lQ8BWB1 Gm25238-201ENSMUST00000174914 89 ntBASIC27.17■■□□□ 1.94
Synpo2lQ8BWB1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Synpo2lQ8BWB1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Synpo2lQ8BWB1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.05■■□□□ 1.92
Synpo2lQ8BWB1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.01■■□□□ 1.91
Synpo2lQ8BWB1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Synpo2lQ8BWB1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Synpo2lQ8BWB1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Synpo2lQ8BWB1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Synpo2lQ8BWB1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Synpo2lQ8BWB1 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.76■■□□□ 1.87
Synpo2lQ8BWB1 Gm27325-201ENSMUST00000175467 74 ntBASIC26.74■■□□□ 1.87
Synpo2lQ8BWB1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Synpo2lQ8BWB1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.65■■□□□ 1.86
Synpo2lQ8BWB1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Synpo2lQ8BWB1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Synpo2lQ8BWB1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
Synpo2lQ8BWB1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Synpo2lQ8BWB1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.53■■□□□ 1.84
Synpo2lQ8BWB1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
Synpo2lQ8BWB1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Synpo2lQ8BWB1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Synpo2lQ8BWB1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Synpo2lQ8BWB1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Synpo2lQ8BWB1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Synpo2lQ8BWB1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.34■■□□□ 1.81
Synpo2lQ8BWB1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Synpo2lQ8BWB1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.32■■□□□ 1.8
Synpo2lQ8BWB1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Synpo2lQ8BWB1 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.31■■□□□ 1.8
Synpo2lQ8BWB1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Synpo2lQ8BWB1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.27■■□□□ 1.8
Synpo2lQ8BWB1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Synpo2lQ8BWB1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Synpo2lQ8BWB1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Synpo2lQ8BWB1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Synpo2lQ8BWB1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.09■■□□□ 1.77
Synpo2lQ8BWB1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Synpo2lQ8BWB1 Rab21-202ENSMUST00000218831 843 ntBASIC26.02■■□□□ 1.76
Synpo2lQ8BWB1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Synpo2lQ8BWB1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Synpo2lQ8BWB1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Synpo2lQ8BWB1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.89■■□□□ 1.74
Synpo2lQ8BWB1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Synpo2lQ8BWB1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.82■■□□□ 1.72
Synpo2lQ8BWB1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Synpo2lQ8BWB1 Gm25262-201ENSMUST00000174934 133 ntBASIC25.79■■□□□ 1.72
Synpo2lQ8BWB1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Synpo2lQ8BWB1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.75■■□□□ 1.71
Synpo2lQ8BWB1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.75■■□□□ 1.71
Synpo2lQ8BWB1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Synpo2lQ8BWB1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Synpo2lQ8BWB1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Synpo2lQ8BWB1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Synpo2lQ8BWB1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Synpo2lQ8BWB1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms