RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 LCN1P1Q5VSP4 162 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 PRAMEF17Q5VTA0 474 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 NIPAL3Q6P499 406 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 BCDIN3DQ7Z5W3 292 aaKnown RBP9.52□□□□□ -0.89
VPS25-203ENST00000589520 ANKRD37Q7Z713 158 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 ATG4DQ86TL0 474 aaPredicted RBP9.52□□□□□ -0.89
VPS25-203ENST00000589520 PHC2Q8IXK0 858 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 C9orf40Q8IXQ3 194 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 ACBD7Q8N6N7 88 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 DTWD2Q8NBA8 298 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 PRSS33Q8NF86 280 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 IFI44Q8TCB0 444 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 TMCO6Q96DC7 493 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 CCDC74BQ96LY2 380 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 GAL3ST4Q96RP7 486 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 GPX7Q96SL4 187 aaPredicted RBP9.52□□□□□ -0.89
VPS25-203ENST00000589520 ADOQ96SZ5 270 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 CHCHD6Q9BRQ6 235 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 ADAM19Q9H013 955 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 OR51E2Q9H255 320 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 WDR54Q9H977 334 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 FAM86C1Q9NVL1 165 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 ATXN7L1Q9ULK2 861 aaPredicted RBP9.52□□□□□ -0.89
VPS25-203ENST00000589520 GPR52Q9Y2T5 361 aa9.52□□□□□ -0.89
VPS25-203ENST00000589520 PTPRZ1P23471 2315 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 LOC100506127A0A0U1RQW1 187 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 ZNF670-ZNF695F2Z2N8 137 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 TMX2-CTNND1H3BSU7 103 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 J3QRE1 110 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 KPNA4O00629 521 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 ADAM11O75078 769 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 CPNE3O75131 537 aaKnown RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 RFPL3O75679 317 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 PDGFBP01127 241 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 HLA-DPB1P04440 258 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 LIMS3P0CW19 117 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 LIMS4P0CW20 117 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 FGF9P31371 208 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 GABRA5P31644 462 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 CRYBB2P43320 205 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 RORCP51449 518 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 MAP2K6P52564 334 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 SUMO3P55854 103 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 TAS2R43P59537 309 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 RNF4P78317 190 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 RUNX1T1Q06455 604 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 CBFBQ13951 182 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 TRAM1Q15629 374 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 NNATQ16517 81 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 TRIM61Q5EBN2 209 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 EMC4Q5J8M3 183 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 PLBD1Q6P4A8 553 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 MEX3DQ86XN8 651 aaKnown RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 GPALPP1Q8IXQ4 340 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 TMCO5AQ8N6Q1 288 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 ZNF321PQ8N8H1 164 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 POMGNT2Q8NAT1 580 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 MINDY2Q8NBR6 621 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 SLC37A3Q8NCC5 494 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 AGBL5Q8NDL9 886 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 OR13C2Q8NGS9 318 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 OR6S1Q8NH40 331 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 OR51A7Q8NH64 312 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 OR5W2Q8NH69 310 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 ZNF563Q8TA94 476 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 TMEM234Q8WY98 164 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 TTC9Q92623 222 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 RPL3LQ92901 407 aaKnown RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 OMA1Q96E52 524 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 ARSGQ96EG1 525 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 SECISBP2Q96T21 854 aaKnown RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 TEAD3Q99594 435 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 LPAR4Q99677 370 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 MED18Q9BUE0 208 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 TBL1XR1Q9BZK7 514 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 ZBTB20Q9HC78 741 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 MCCC2Q9HCC0 563 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 AKIP1Q9NQ31 210 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 SLC22A11Q9NSA0 550 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 ASB6Q9NWX5 421 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 ERVK13-1Q9NX77 482 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 TAS2R16Q9NYV7 291 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 AKAP7Q9P0M2 348 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 NOX1Q9Y5S8 564 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 SPIN1Q9Y657 262 aaPredicted RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 TPRP12270 2363 aaKnown RBP9.51□□□□□ -0.89
VPS25-203ENST00000589520 GON4LQ3T8J9 2241 aa9.51□□□□□ -0.89
VPS25-203ENST00000589520 KNL1Q8NG31 2342 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 EML5Q05BV3 1969 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 TRDV1A0A1B0GX56 115 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 IDSB3KWA1 339 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 ICOSLGO75144 302 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 GPX5O75715 221 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 ZFAND5O76080 213 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 NTN1O95631 604 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 MT-ATP6P00846 226 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 IL1AP01583 271 aa9.5□□□□□ -0.89
VPS25-203ENST00000589520 KLK3P07288 261 aaPredicted RBP9.5□□□□□ -0.89
VPS25-203ENST00000589520 ADRA2AP08913 450 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms