RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 SGO1Q5FBB7 561 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 ATPAF1Q5TC12 328 aaPredicted RBP4.97□□□□□ -1.61
DNMT1-220ENST00000589351 TRAT1Q6PIZ9 186 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 KLHL17Q6TDP4 642 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 PLXDC2Q6UX71 529 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 COMMD6Q7Z4G1 85 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 CMC1Q7Z7K0 106 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 CCDC25Q86WR0 208 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 ARMC8Q8IUR7 673 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 TMCO5AQ8N6Q1 288 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 ZBTB8BQ8NAP8 495 aaPredicted RBP4.97□□□□□ -1.61
DNMT1-220ENST00000589351 OR52B6Q8NGF0 335 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 FNDC9Q8TBE3 224 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 ZNF675Q8TD23 568 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 DUSP19Q8WTR2 217 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 KCTD4Q8WVF5 259 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 AKAP1Q92667 903 aaKnown RBP eCLIP4.97□□□□□ -1.61
DNMT1-220ENST00000589351 ITFG2Q969R8 447 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 VPS33AQ96AX1 596 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 MTBPQ96DY7 904 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 PHF21BQ96EK2 531 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 KTI12Q96EK9 354 aaPredicted RBP4.97□□□□□ -1.61
DNMT1-220ENST00000589351 BTBD9Q96Q07 612 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 BBS4Q96RK4 519 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 KCNJ15Q99712 375 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 RHNO1Q9BSD3 238 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 TBL1XR1Q9BZK7 514 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 AMBRA1Q9C0C7 1298 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 IQCGQ9H095 443 aaKnown RBP4.97□□□□□ -1.61
DNMT1-220ENST00000589351 DPH5Q9H2P9 285 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 SMURF2Q9HAU4 748 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 TIGARQ9NQ88 270 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 YAE1D1Q9NRH1 226 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 FAIMQ9NVQ4 179 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 MED11Q9P086 117 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 VPS29Q9UBQ0 182 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 FBXL2Q9UKC9 423 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 UTS2RQ9UKP6 389 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 HSF4Q9ULV5 492 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 ABCG2Q9UNQ0 655 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 UTP11Q9Y3A2 253 aaKnown RBP4.97□□□□□ -1.61
DNMT1-220ENST00000589351 ZNF337Q9Y3M9 751 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 CCL27Q9Y4X3 112 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 FBN3Q75N90 2809 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 MED12LQ86YW9 2145 aa4.97□□□□□ -1.61
DNMT1-220ENST00000589351 CHD3Q12873 2000 aaKnown RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 A0A087WZY1 265 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 OR2M5A3KFT3 312 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 A4D1N5 150 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 A8MV72 311 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 STX16-NPEPL1H3BU86 382 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 SCDO00767 359 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 OR7A17O14581 309 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 STX16O14662 325 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 CASQ2O14958 399 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 CD5LO43866 347 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 SIX3O95343 332 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 TUBBP07437 444 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 CT45A8P0DMV1 189 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 CT45A9P0DMV2 189 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 ME2P23368 584 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 LMO1P25800 156 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 EVI2BP34910 448 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 ARL3P36405 182 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 MAGEA4P43358 317 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 SERPINB8P50452 374 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 SUCLG1P53597 346 aaKnown RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 PLTPP55058 493 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 DSCR9P59020 149 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 HTD2P86397 168 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 UAP1Q16222 522 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 NRF1Q16656 503 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 GGTA1PQ4G0N0 100 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 CT45A2Q5DJT8 189 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 SH2D4BQ5SQS7 431 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 ADAM5Q6NVV9 412 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 STAC2Q6ZMT1 411 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 SSX8Q7RTT4 187 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 FAM9CQ8IZT9 166 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 CENPLQ8N0S6 344 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 MMGT1Q8N4V1 131 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 METTL25Q8N6Q8 603 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 PTGR2Q8N8N7 351 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 FADS6Q8N9I5 356 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 OR2M3Q8NG83 312 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 OR4F6Q8NGB9 312 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 IL17DQ8TAD2 202 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 SMAP2Q8WU79 429 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 HSD17B8Q92506 261 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 EFHD2Q96C19 240 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 CNRIP1Q96F85 164 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 ZBED6CLQ96FA7 236 aaPredicted RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 MARK4Q96L34 752 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 HS6ST2Q96MM7 605 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 ZNF681Q96N22 645 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 PRPF18Q99633 342 aaKnown RBP4.96□□□□□ -1.62
DNMT1-220ENST00000589351 BEX2Q9BXY8 128 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 FUT8Q9BYC5 575 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 ACTR6Q9GZN1 396 aa4.96□□□□□ -1.62
DNMT1-220ENST00000589351 RAB17Q9H0T7 212 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms