RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 EWSR1Q01844 656 aaKnown RBP eCLIP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 POU3F1Q03052 451 aaPredicted RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 XRCC4Q13426 336 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 COTL1Q14019 142 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 PTGR1Q14914 329 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 ATXN7L3Q14CW9 347 aaPredicted RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 EXT1Q16394 746 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 ZNF829Q3KNS6 432 aaPredicted RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 OTUD3Q5T2D3 398 aaPredicted RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 AGAP7PQ5VUJ5 663 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 GFRALQ6UXV0 394 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 TMEM219Q86XT9 240 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 TBC1D10CQ8IV04 446 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 VRK3Q8IV63 474 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 ODF3L1Q8IXM7 274 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 FAM58AQ8N1B3 248 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 DNAJC22Q8N4W6 341 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 LINC00469Q8N7U9 141 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 RBMXL3Q8N7X1 1067 aaKnown RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 PPTC7Q8NI37 304 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 LRRC20Q8TCA0 184 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 SMG7Q92540 1137 aaKnown RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 MRPL24Q96A35 216 aaKnown RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 ZNF578Q96N58 590 aaPredicted RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 AGAP4Q96P64 663 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 ZBP1Q9H171 429 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 CXXC4Q9H2H0 198 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 ELOVL6Q9H5J4 265 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 PELI2Q9HAT8 420 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 UBE2TQ9NPD8 197 aaPredicted RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 IL26Q9NPH9 171 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 PNO1Q9NRX1 252 aaKnown RBP5.98□□□□□ -1.45
LRCH3-215ENST00000476664 AHSPQ9NZD4 102 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 MTCH1Q9NZJ7 389 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 TUBGCP4Q9UGJ1 667 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 CD300AQ9UGN4 299 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 POMT2Q9UKY4 750 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 PI4KAP42356 2102 aa5.98□□□□□ -1.45
LRCH3-215ENST00000476664 ADAMTS9Q9P2N4 1935 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 BAZ2AQ9UIF9 1905 aaKnown RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 A0A1B0GUH1 482 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 OTOL1A6NHN0 477 aaPredicted RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 HHLA1C9JL84 531 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 WWP2O00308 870 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 FPGTO14772 594 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 EPHB6O15197 1021 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 LRATO95237 230 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 IGF1P05019 195 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 TPM3P06753 285 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 CLTAP09496 248 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 H2BFMP0C1H6 154 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 UMPSP11172 480 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 ATP1B2P14415 290 aaPredicted RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 ACADSP16219 412 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 ITGA2P17301 1181 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 GSTM3P21266 225 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 CALML3P27482 149 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 UGT1A5P35504 534 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 CCNG1P51959 295 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 PLP1P60201 277 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 PAX5Q02548 391 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 SLC20A2Q08357 652 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 PEX6Q13608 980 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 USF2Q15853 346 aaPredicted RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 MANEAQ5SRI9 462 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 SLC25A25Q6KCM7 469 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 DHDDSQ86SQ9 333 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 SERPINA9Q86WD7 417 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 MARCH9Q86YJ5 346 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 ABCA7Q8IZY2 2146 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 SLC39A11Q8N1S5 342 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 NEXN-AS1Q8NBZ9 246 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 SLC37A3Q8NCC5 494 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 CD300LFQ8TDQ1 290 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 PDCD6IPQ8WUM4 868 aaKnown RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 MAIP1Q8WWC4 291 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 ADIPOR1Q96A54 375 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 PPP1R16AQ96I34 528 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 C8orf76Q96K31 380 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 ART5Q96L15 291 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 ZNF396Q96N95 335 aaPredicted RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 SLC38A2Q96QD8 506 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 FEM1AQ9BSK4 669 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 C1QTNF3Q9BXJ4 246 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 SLC25A51Q9H1U9 297 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 ALG9Q9H6U8 611 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 FKRPQ9H9S5 495 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 GPN2Q9H9Y4 310 aaPredicted RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 SLC25A19Q9HC21 320 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 MRPL39Q9NYK5 338 aaKnown RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 POLDIP2Q9Y2S7 368 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 MEMO1Q9Y316 297 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 RHBDD3Q9Y3P4 386 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 TIMM10BQ9Y5J6 103 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 MTCL1Q9Y4B5 1905 aaKnown RBP5.97□□□□□ -1.45
LRCH3-215ENST00000476664 THADAQ6YHU6 1953 aa5.97□□□□□ -1.45
LRCH3-215ENST00000476664 A0A1W2PPI3 338 aa5.96□□□□□ -1.46
LRCH3-215ENST00000476664 RPS10-NUDT3A0A1W2PQS6 291 aa5.96□□□□□ -1.46
LRCH3-215ENST00000476664 RGS14O43566 566 aa5.96□□□□□ -1.46
LRCH3-215ENST00000476664 STX11O75558 287 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms