RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 COQ10BQ9H8M1 238 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 CTPS2Q9NRF8 586 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 RLIMQ9NVW2 624 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 PMS2P2O95744 297 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 OPN1LWP04000 364 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 SF3A3Q12874 501 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHTOP-202ENST00000368687 NANOGP8Q6NSW7 305 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 ERICH5Q6P6B1 374 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 TMPPEQ6ZT21 453 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 PATL1Q86TB9 770 aaKnown RBP16.57■□□□□ 0.24
CHTOP-202ENST00000368687 ARMC8Q8IUR7 673 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 RASSF5Q8WWW0 418 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 ECSITQ9BQ95 431 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 SLC39A3Q9BRY0 314 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 RBM24Q9BX46 236 aaKnown RBP16.57■□□□□ 0.24
CHTOP-202ENST00000368687 NANOGQ9H9S0 305 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 KLHL9Q9P2J3 617 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 TRAPPC4Q9Y296 219 aa16.57■□□□□ 0.24
CHTOP-202ENST00000368687 ABCA12Q86UK0 2595 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 TMED7-TICAM2A0A0A6YYA0 188 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 LOC100653049A0A140TA62 436 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 A8MXE2 369 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 SULT2B1O00204 365 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 AP3D1O14617 1153 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 SNX3O60493 162 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 ADAM11O75078 769 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 SMNDC1O75940 238 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHTOP-202ENST00000368687 KRT34O76011 436 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 PRKD3O94806 890 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 TFPIP10646 304 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 ENPP1P22413 925 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 CXCR1P25024 350 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 SHC1P29353 583 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 TACR3P29371 465 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 PCGF2P35227 344 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 ACAA2P42765 397 aaKnown RBP16.56■□□□□ 0.24
CHTOP-202ENST00000368687 KIR2DL2P43627 348 aaPredicted RBP16.56■□□□□ 0.24
CHTOP-202ENST00000368687 DIO1P49895 249 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 AGFG1P52594 562 aaKnown RBP16.56■□□□□ 0.24
CHTOP-202ENST00000368687 PCBP3P57721 371 aaKnown RBP16.56■□□□□ 0.24
CHTOP-202ENST00000368687 NCALDP61601 193 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 GNGT1P63211 74 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 CAPRIN1Q14444 709 aaKnown RBP16.56■□□□□ 0.24
CHTOP-202ENST00000368687 PLXDC2Q6UX71 529 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 FCRLAQ7L513 359 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 STK32CQ86UX6 486 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 ADGRG3Q86Y34 549 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 PTOV1Q86YD1 416 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 C10orf111Q8N326 155 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 CLIP4Q8N3C7 705 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 OR10A6Q8NH74 314 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 ZNF524Q96C55 264 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 STARD4Q96DR4 205 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 CMTM5Q96DZ9 223 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 TRIM8Q9BZR9 551 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 ADAM19Q9H013 955 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 ELOVL5Q9NYP7 299 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 ARMCX1Q9P291 453 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 TESQ9UGI8 421 aaKnown RBP16.56■□□□□ 0.24
CHTOP-202ENST00000368687 OSGIN1Q9UJX0 560 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 PROCRQ9UNN8 238 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 TMED7Q9Y3B3 224 aa16.56■□□□□ 0.24
CHTOP-202ENST00000368687 APCP25054 2843 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 FXYD1O00168 92 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 NDUFAB1O14561 156 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 GOSR1O95249 250 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 C8BP07358 591 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 GKN3PP0CG01 181 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 KIR2DL3P43628 341 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 SEC24CP53992 1094 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 TMEM201Q5SNT2 666 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 LUZP2Q86TE4 346 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 MTDHQ86UE4 582 aaKnown RBP16.55■□□□□ 0.24
CHTOP-202ENST00000368687 CADM2Q8N3J6 435 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 FAM222BQ8WU58 562 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 SRXN1Q9BYN0 137 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 FAM107BQ9H098 131 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 C12orf10Q9HB07 376 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 KLHL13Q9P2N7 655 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 RPS6KB2Q9UBS0 482 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 CSMD1Q96PZ7 3565 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 DCHS2Q6V1P9 2916 aa16.55■□□□□ 0.24
CHTOP-202ENST00000368687 TUBAL3A6NHL2 446 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 EIF1BO60739 113 aaKnown RBP16.54■□□□□ 0.24
CHTOP-202ENST00000368687 DRD4P21917 467 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 SIRPAP78324 504 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 MYBPHQ13203 477 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 VEZF1Q14119 521 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 VMACQ2NL98 169 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 VWA1Q6PCB0 445 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 C5orf46Q6UWT4 87 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 RANBP3LQ86VV4 465 aaPredicted RBP16.54■□□□□ 0.24
CHTOP-202ENST00000368687 ZZZ3Q8IYH5 903 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 LSMEM1Q8N8F7 131 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 DNAJA4Q8WW22 397 aaPredicted RBP16.54■□□□□ 0.24
CHTOP-202ENST00000368687 HOPXQ9BPY8 73 aaPredicted RBP16.54■□□□□ 0.24
CHTOP-202ENST00000368687 ZNF559Q9BR84 538 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 POTEKPQ9BYX7 375 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 TRIM2Q9C040 744 aa16.54■□□□□ 0.24
CHTOP-202ENST00000368687 EFCAB1Q9HAE3 211 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms