RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ZFP1Q6P2D0 407 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 C3orf49Q96BT1 292 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 ZNF347Q96SE7 839 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 C12orf10Q9HB07 376 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 RPS6KB2Q9UBS0 482 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 AP4S1Q9Y587 144 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 FASNP49327 2511 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 J3KTA2 159 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 FFAR1O14842 300 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 CELA3AP09093 270 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 THRBP10828 461 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 IFNA8P32881 189 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 YAP1P46937 504 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 TAS2R41P59536 307 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 ALDH6A1Q02252 535 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 FOXF1Q12946 379 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 SLC10A1Q14973 349 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 ZNF324BQ6AW86 544 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 ULK3Q6PHR2 472 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 YRDCQ86U90 279 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 SIAH3Q8IW03 269 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 OFCC1Q8IZS5 231 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 GALNT11Q8NCW6 608 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 OR14L1PQ8NHC6 308 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 POC1BQ8TC44 478 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 PIP5K1AQ99755 562 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 CTPS2Q9NRF8 586 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 RIMS3Q9UJD0 308 aa17.95■□□□□ 0.46
PDLIM2-221ENST00000622702 MYO18BQ8IUG5 2567 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 RP1L1Q8IWN7 2480 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 LYPD3O95274 346 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 WISP1O95388 367 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 MT-ND1P03886 318 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 THY1P04216 161 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 TACR3P29371 465 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 B3GALT5-AS1P59052 145 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 CMPK2Q5EBM0 449 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 ALG10BQ5I7T1 473 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 ATG4DQ86TL0 474 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 PIK3C3Q8NEB9 887 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 PYDC1Q8WXC3 89 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 SLC41A3Q96GZ6 507 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 DHRS1Q96LJ7 313 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 NPAS1Q99742 590 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 SLX1AQ9BQ83 275 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 PIGQQ9BRB3 760 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 OSGIN1Q9UJX0 560 aa17.94■□□□□ 0.46
PDLIM2-221ENST00000622702 ZNF407Q9C0G0 2248 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 OR2M5A3KFT3 312 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 CHP2O43745 196 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 DIRAS1O95057 198 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 IGHG3P01860 377 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 ELK4P28324 431 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 APOBEC1P41238 236 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 POLR2HP52434 150 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 CDH12P55289 794 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 ELF3P78545 371 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 ST3GAL3Q11203 375 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 MERTKQ12866 999 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 WIPI1Q5MNZ9 446 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 RAET1LQ5VY80 246 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 AAGABQ6PD74 315 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 GDF7Q7Z4P5 450 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 SLC38A4Q969I6 547 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 TSPAN10Q9H1Z9 355 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 NMNAT1Q9HAN9 279 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 SELENONQ9NZV5 590 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 RPH3AQ9Y2J0 694 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 DNAJC13O75165 2243 aa17.93■□□□□ 0.46
PDLIM2-221ENST00000622702 MED12Q93074 2177 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 SHISA8B8ZZ34 492 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 H3BNX3 289 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 LINC01387J3KSC0 135 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 HNRNPRO43390 633 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 PNMTP11086 282 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 EDN3P14138 238 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 GNLYP22749 145 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 TCEA1P23193 301 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 MAP2K6P52564 334 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 MRPL49Q13405 166 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 STMN2Q93045 179 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 MPP4Q96JB8 637 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 FNDC11Q9BVV2 318 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 DEFB127Q9H1M4 99 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 ANKRD19PQ9H560 264 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 S100A14Q9HCY8 104 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 PLSCR2Q9NRY7 297 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 MAN2C1Q9NTJ4 1040 aa17.92■□□□□ 0.46
PDLIM2-221ENST00000622702 A0A087WUJ7 227 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 A0A1W2PRQ8 180 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 ADAMDEC1O15204 470 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 HCN1O60741 890 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 WISP2O76076 250 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 H1F0P07305 194 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 FCGR1AP12314 374 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 CHMP24386 653 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 UQCRFS1P47985 274 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 TDGF1P3P51864 188 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 GFRA1P56159 465 aa17.91■□□□□ 0.46
PDLIM2-221ENST00000622702 DGCR6Q14129 220 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms