RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SEZ6L2Q6UXD5 910 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 KIRREL3Q8IZU9 778 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 KBTBD8Q8NFY9 601 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 MIPOL1Q8TD10 442 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 EPS8L3Q8TE67 593 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 ZNF75CPQ92670 426 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 TUBGCP3Q96CW5 907 aa15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 ROPN1BQ9BZX4 212 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 ROPN1Q9HAT0 212 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-227ENST00000602011 NPIPA5A0A0B4J1W7 369 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 TMEM233B4DJY2 109 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 SHISA9B4DS77 424 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 NPIPA7E9PJI5 369 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 RNASET2O00584 256 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 SNUPNO95149 360 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 CD8AP01732 235 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 NPIPA8P0DM63 369 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 HTR3AP46098 478 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 MERTKQ12866 999 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 FAPQ12884 760 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 GPR68Q15743 365 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 HMBOX1Q6NT76 420 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 PHC2Q8IXK0 858 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 ZNF619Q8N2I2 560 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 ZNF433Q8N7K0 673 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 OR8J2Q8NGG1 315 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 PIGXQ8TBF5 258 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 DHRS9Q9BPW9 319 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 ZNF350Q9GZX5 532 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 PARPBPQ9NWS1 579 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 NOP53Q9NZM5 478 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 PRSS50Q9UI38 385 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 TRAPPC4Q9Y296 219 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 FREM1Q5H8C1 2179 aa15.74■□□□□ 0.11
SHKBP1-227ENST00000602011 CR1P17927 2039 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 IGHV3-15A0A0B4J1V0 119 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 CIB4A0PJX0 185 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 TLDC2A0PJX2 215 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 ABCD4O14678 606 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 UGT2B17O75795 530 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 PMS2P2O95744 297 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 DHRS4L1P0CG22 281 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 IGHV1-2P23083 117 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 PAX7P23759 505 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 TTKP33981 857 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 CDH11P55287 796 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 TXNL4AP83876 142 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 ANXA8L1Q5VT79 327 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 C16orf62Q7Z3J2 963 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 GRINAQ7Z429 371 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 KRTCAP2Q8N6L1 136 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 PMM1Q92871 262 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 NEUROG1Q92886 237 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 APH1AQ96BI3 265 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 C3orf30Q96M34 536 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 MUS81Q96NY9 551 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 EXOSC3Q9NQT5 275 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 CBLN4Q9NTU7 201 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 ASB6Q9NWX5 421 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 TAS2R16Q9NYV7 291 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 ZDHHC2Q9UIJ5 367 aa15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 NOSIPQ9Y314 301 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-227ENST00000602011 A8MV72 311 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 FCMRO60667 390 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 EIF1BO60739 113 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 MRPL33O75394 65 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 CYP7B1O75881 506 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 H6PDO95479 791 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 G6PDP11413 515 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 SOAT1P35610 550 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 SLC16A1P53985 500 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 RAB35Q15286 201 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 PGS1Q32NB8 556 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 NDUFAF6Q330K2 333 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 CHRFAM7AQ494W8 412 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 ABLIM2Q6H8Q1 611 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 ZNF544Q6NX49 715 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 LRRC34Q8IZ02 419 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 FBXL14Q8N1E6 418 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 UBE2J2Q8N2K1 259 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 OR10H5Q8NGA6 315 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 OR5D16Q8NGK9 328 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 ZNF563Q8TA94 476 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 TCP10LQ8TDR4 215 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 SLC35G5Q96KT7 338 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 ZNF300Q96RE9 604 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 C1orf50Q9BV19 199 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 SAP130Q9H0E3 1048 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 YAE1D1Q9NRH1 226 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 CHRNA9Q9UGM1 479 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 LGALS13Q9UHV8 139 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 B3GALT5Q9Y2C3 310 aa15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 NUP214P35658 2090 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-227ENST00000602011 RNF103-CHMP3A0A140T963 221 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 PRSS51A0A1B0GVH4 220 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 ELOA3DA6NLF2 546 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 RAMP1O60894 148 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 ADAM11O75078 769 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 UBTFL6P0CB48 400 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms