RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 OR4C11Q6IEV9 310 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 TMEM154Q6P9G4 183 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 CASP12Q6UXS9 341 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 NPSR1Q6W5P4 371 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 PPP1R21Q6ZMI0 780 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 OVCH2Q7RTZ1 564 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 TMCO5AQ8N6Q1 288 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 RNF214Q8ND24 703 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 OR4C13Q8NGP0 309 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 EEF1AKMT1Q8WVE0 214 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 GATAD2BQ8WXI9 593 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 PEX13Q92968 403 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 NEURL3Q96EH8 262 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 FAM118BQ9BPY3 351 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 MS4A8Q9BY19 250 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF717Q9BY31 904 aaPredicted RBP5.45□□□□□ -1.54
HDAC3-206ENST00000471968 TBL1XR1Q9BZK7 514 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 NT5DC2Q9H857 520 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 WDR41Q9HAD4 459 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 PATZ1Q9HBE1 687 aaKnown RBP5.45□□□□□ -1.54
HDAC3-206ENST00000471968 SAYSD1Q9NPB0 183 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 DECR2Q9NUI1 292 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 MAT2BQ9NZL9 334 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF490Q9ULM2 529 aaPredicted RBP5.45□□□□□ -1.54
HDAC3-206ENST00000471968 OR10H1Q9Y4A9 318 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
HDAC3-206ENST00000471968 SDR42E2A6NKP2 422 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 LRRC53A6NM62 1247 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 C17orf100A8MU93 164 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 FOXE1O00358 373 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-206ENST00000471968 EFNA2O43921 213 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 SKAP2O75563 359 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-206ENST00000471968 VAPBO95292 243 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 CLIC3O95833 236 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 TGFB1P01137 390 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 CHRM4P08173 479 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 UROSP10746 265 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 SKILP12757 684 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 UQCRC2P22695 453 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 NR4A1P22736 598 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 MPGP29372 298 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 VPS41P49754 854 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 AP1S2P56377 157 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 KLHL30Q0D2K2 578 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 FOXF1Q12946 379 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 NPRL3Q12980 569 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 HNRNPA0Q13151 305 aaKnown RBP5.44□□□□□ -1.54
HDAC3-206ENST00000471968 PCGF3Q3KNV8 242 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 C3orf36Q3SXR2 165 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 TMEM35AQ53FP2 167 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 TRMT12Q53H54 448 aaKnown RBP5.44□□□□□ -1.54
HDAC3-206ENST00000471968 E4F1Q66K89 784 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-206ENST00000471968 OR52E8Q6IFG1 317 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 VSTM4Q8IW00 320 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 SLC44A2Q8IWA5 706 aaPredicted RBP5.44□□□□□ -1.54
HDAC3-206ENST00000471968 MYO1HQ8N1T3 1032 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 KLHL36Q8N4N3 616 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 SPICQ8N5J4 248 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 OR4K14Q8NGD5 310 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 WDR20Q8TBZ3 569 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 RAB40AQ8WXH6 277 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 NSMAFQ92636 917 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 CCDC126Q96EE4 140 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 CLPTM1LQ96KA5 538 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 BBS4Q96RK4 519 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 RBBP8Q99708 897 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 KLHDC3Q9BQ90 382 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 PCGF1Q9BSM1 259 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 HEMGNQ9BXL5 484 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 TRIM15Q9C019 465 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 CCDC68Q9H2F9 335 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 SAP30LQ9HAJ7 183 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 CRLF2Q9HC73 371 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 HINT3Q9NQE9 182 aaKnown RBP5.44□□□□□ -1.54
HDAC3-206ENST00000471968 GLS2Q9UI32 602 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF639Q9UID6 485 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF346Q9UL40 294 aaKnown RBP5.44□□□□□ -1.54
HDAC3-206ENST00000471968 TRIM33Q9UPN9 1127 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 ASB4Q9Y574 426 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 DNAH17Q9UFH2 4485 aa5.44□□□□□ -1.54
HDAC3-206ENST00000471968 IGKV3D-15A0A087WSY6 115 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 CENPVL1A0A0U1RR11 272 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 CENPVL3A0A0U1RRI6 287 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 SCDO00767 359 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF195O14628 629 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 PSMD3O43242 534 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 IGKV3-15P01624 115 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 OPN1SWP03999 348 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 TPM2P07951 284 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 THRBP10828 461 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 CD1DP15813 335 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 PORP16435 677 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 PCSK2P16519 638 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF14P17017 642 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 MAKP20794 623 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 ELK4P28324 431 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 NMBRP28336 390 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 RGS4P49798 205 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 RAP1GDS1P52306 607 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 GDF10P55107 478 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms