RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 FBXW4P57775 412 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 OCLNQ16625 522 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 C3orf38Q5JPI3 329 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 SLC25A30Q5SVS4 291 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 MEDAGQ5VYS4 303 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 PLAG1Q6DJT9 500 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 FAM26EQ8N5C1 309 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 TTC9Q92623 222 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 GGHQ92820 318 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 C12orf10Q9HB07 376 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 MMP25Q9NPA2 562 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 FOXJ2Q9P0K8 574 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 TCFL5Q9UL49 500 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 ICAM5Q9UMF0 924 aa16.58■□□□□ 0.24
VIM-201ENST00000224237 SPAARA0A1B0GVQ0 90 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 ELOA3DA6NLF2 546 aaPredicted RBP16.57■□□□□ 0.24
VIM-201ENST00000224237 TLX2O43763 284 aaPredicted RBP16.57■□□□□ 0.24
VIM-201ENST00000224237 SLC1A3P43003 542 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 P2RX1P51575 399 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 EFNB1P98172 346 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 MVKQ03426 396 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 EMX1Q04741 257 aaPredicted RBP16.57■□□□□ 0.24
VIM-201ENST00000224237 CBFBQ13951 182 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 PGGHGQ32M88 737 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 ELOA3BQ3SY89 546 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 SLC30A6Q6NXT4 461 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 ATG4DQ86TL0 474 aaPredicted RBP16.57■□□□□ 0.24
VIM-201ENST00000224237 ELOA3Q8NG57 546 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 OR11G2Q8NGC1 345 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 OR5W2Q8NH69 310 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 M1APQ8TC57 530 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 CT55Q8WUE5 264 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 HGDQ93099 445 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 CNOT2Q9NZN8 540 aaKnown RBP16.57■□□□□ 0.24
VIM-201ENST00000224237 SIGLEC7Q9Y286 467 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 SDK2Q58EX2 2172 aa16.57■□□□□ 0.24
VIM-201ENST00000224237 NSG1A0A0A6YYJ2 146 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 HTR3EA5X5Y0 456 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 EFCAB10A6NFE3 127 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 SOCS6O14544 535 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 GNB5O14775 395 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 HCN1O60741 890 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 ENTPD6O75354 484 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 OR2J2O76002 312 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 MT-ND2P03891 347 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 PGCP20142 388 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 ITPKBP27987 946 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 NDUFAF7Q7L592 441 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 NUP54Q7Z3B4 507 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 MARCH9Q86YJ5 346 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 ESX1Q8N693 406 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 SLC15A4Q8N697 577 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 OR5M3Q8NGP4 307 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 OR13C2Q8NGS9 318 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 OR4Q3Q8NH05 313 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 TMEM163Q8TC26 289 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 SAMD8Q96LT4 415 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 MED17Q9NVC6 651 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 GPR83Q9NYM4 423 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 RSL24D1Q9UHA3 163 aaKnown RBP16.56■□□□□ 0.24
VIM-201ENST00000224237 IGF2P01344 180 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 CDK1P06493 297 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 FUT1P19526 365 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 MST1P26927 711 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 FXYD6P3P58550 94 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 TUBA3CQ13748 450 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 SMARCD3Q6STE5 483 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 OAFQ86UD1 273 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 CYP4Z2PQ8N1L4 340 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 SLC43A2Q8N370 569 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 OR13F1Q8NGS4 319 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 MUL1Q969V5 352 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 LRR1Q96L50 414 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 TMEM43Q9BTV4 400 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 IRF2BPLQ9H1B7 796 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 DNAJC27Q9NZQ0 273 aa16.56■□□□□ 0.24
VIM-201ENST00000224237 ZNF701M0R085 212 aaPredicted RBP16.55■□□□□ 0.24
VIM-201ENST00000224237 CDC40O60508 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
VIM-201ENST00000224237 NUDT14O95848 222 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 FADS2O95864 444 aaKnown RBP16.55■□□□□ 0.24
VIM-201ENST00000224237 HMGN1P05114 100 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 FBXO45P0C2W1 286 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 PIPP12273 146 aaPredicted RBP16.55■□□□□ 0.24
VIM-201ENST00000224237 RPS18P62269 152 aaKnown RBP16.55■□□□□ 0.24
VIM-201ENST00000224237 RPS15P62841 145 aaKnown RBP16.55■□□□□ 0.24
VIM-201ENST00000224237 C17orf67Q0P5P2 114 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 SSPNQ14714 243 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 GTF2IRD2BQ6EKJ0 949 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 LYPD8Q6UX82 237 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 GTF2IRD2Q86UP8 949 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 STX19Q8N4C7 294 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 B4GALNT2Q8NHY0 566 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 RNF138Q8WVD3 245 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 FAR1Q8WVX9 515 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 FGF11Q92914 225 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 SGTBQ96EQ0 304 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 RASL10BQ96S79 203 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 ADAM19Q9H013 955 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 UBQLN3Q9H347 655 aa16.55■□□□□ 0.24
VIM-201ENST00000224237 SLC24A3Q9HC58 644 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms