RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 DCAF10Q5QP82 559 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 TMEM81Q6P7N7 255 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 IL20RBQ6UXL0 311 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 LSRQ86X29 649 aaPredicted RBP18.97■□□□□ 0.63
PNKP-203ENST00000593946 PFN4Q8NHR9 129 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 B4GALNT2Q8NHY0 566 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 BRIX1Q8TDN6 353 aaKnown RBP18.97■□□□□ 0.63
PNKP-203ENST00000593946 PSMF1Q92530 271 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 CCNL2Q96S94 520 aaPredicted RBP18.97■□□□□ 0.63
PNKP-203ENST00000593946 METTL7AQ9H8H3 244 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 MEPEQ9NQ76 525 aaPredicted RBP18.97■□□□□ 0.63
PNKP-203ENST00000593946 MED31Q9Y3C7 131 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 DCHS1Q96JQ0 3298 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 MAGEA13PA6NCF6 341 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 SOX14O95416 240 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 PGCP20142 388 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 ITPKBP27987 946 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 CASP3P42574 277 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 GPR4P46093 362 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 PRKCDQ05655 676 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 CBFBQ13951 182 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 PTGES3Q15185 160 aaKnown RBP18.96■□□□□ 0.63
PNKP-203ENST00000593946 COL28A1Q2UY09 1125 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 JMJD6Q6NYC1 403 aaPredicted RBP18.96■□□□□ 0.63
PNKP-203ENST00000593946 ATG4DQ86TL0 474 aaPredicted RBP18.96■□□□□ 0.63
PNKP-203ENST00000593946 CCDC71Q8IV32 467 aaPredicted RBP18.96■□□□□ 0.63
PNKP-203ENST00000593946 SIRT6Q8N6T7 355 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 SETD9Q8NE22 299 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 SECISBP2Q96T21 854 aaKnown RBP18.96■□□□□ 0.63
PNKP-203ENST00000593946 C20orf141Q9NUB4 165 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 WIF1Q9Y5W5 379 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 HSPE1-MOB4S4R3N1 261 aa18.96■□□□□ 0.63
PNKP-203ENST00000593946 DCDC2BA2VCK2 349 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 ZAR1LA6NP61 321 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 B4DXG7 233 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 GGT2P36268 569 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 ST13P50502 369 aaKnown RBP18.95■□□□□ 0.62
PNKP-203ENST00000593946 TPD52P55327 224 aaPredicted RBP18.95■□□□□ 0.62
PNKP-203ENST00000593946 CTBP2P56545 445 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 SNTA1Q13424 505 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 TOMM34Q15785 309 aaPredicted RBP18.95■□□□□ 0.62
PNKP-203ENST00000593946 ISLR2Q6UXK2 745 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 TMEM156Q8N614 296 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 ZNF563Q8TA94 476 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 GPR119Q8TDV5 335 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 FBLIM1Q8WUP2 373 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 THOC3Q96J01 351 aaKnown RBP18.95■□□□□ 0.62
PNKP-203ENST00000593946 APOL4Q9BPW4 351 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 ADAM19Q9H013 955 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 SH2D2AQ9NP31 389 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 TMEM5Q9Y2B1 443 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 CNTRLQ7Z7A1 2325 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 AKAP13Q12802 2813 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 SPTBN2O15020 2390 aa18.95■□□□□ 0.62
PNKP-203ENST00000593946 IGLV3-32A0A0A0MS00 114 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 GMFGO60234 142 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 TNFAIP8O95379 198 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 NUDT14O95848 222 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 IGFBP1P08833 259 aaPredicted RBP18.94■□□□□ 0.62
PNKP-203ENST00000593946 PNMTP11086 282 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 SUMO3P55854 103 aaPredicted RBP18.94■□□□□ 0.62
PNKP-203ENST00000593946 CD47Q08722 323 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 ACER2Q5QJU3 275 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 B3GNTL1Q67FW5 361 aaPredicted RBP18.94■□□□□ 0.62
PNKP-203ENST00000593946 TTC33Q6PID6 262 aaPredicted RBP18.94■□□□□ 0.62
PNKP-203ENST00000593946 RASSF6Q6ZTQ3 369 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 KIF18BQ86Y91 864 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 C12orf10Q9HB07 376 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 CPNE5Q9HCH3 593 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 C2orf72A6NCS6 295 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 ANKUB1A6NFN9 424 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 KPNA4O00629 521 aaPredicted RBP18.94■□□□□ 0.62
PNKP-203ENST00000593946 CDC42EP2O14613 210 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 IFI30P13284 250 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 NUP107P57740 925 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 AIMP2Q13155 320 aaKnown RBP18.94■□□□□ 0.62
PNKP-203ENST00000593946 CTU2Q2VPK5 515 aaKnown RBP18.94■□□□□ 0.62
PNKP-203ENST00000593946 OR5M10Q6IEU7 315 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 TMPRSS11FQ6ZWK6 438 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 VASH2Q86V25 355 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 PAQR8Q8TEZ7 354 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 BPIFA2Q96DR5 249 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 FER1L6-AS2Q96M78 137 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 FRMD6Q96NE9 622 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 ING2Q9H160 280 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 DSN1Q9H410 356 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 ZNF696Q9H7X3 374 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 ATP13A2Q9NQ11 1180 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 SDHAF3Q9NRP4 125 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 HPF1Q9NWY4 346 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 HRH3Q9Y5N1 445 aa18.94■□□□□ 0.62
PNKP-203ENST00000593946 H3BN98 237 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 GNB5O14775 395 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 CDC40O60508 579 aaKnown RBP eCLIP18.93■□□□□ 0.62
PNKP-203ENST00000593946 MAKP20794 623 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 SDHBP21912 280 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 POU1F1P28069 291 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 IL5RAQ01344 420 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 QPRTQ15274 297 aa18.93■□□□□ 0.62
PNKP-203ENST00000593946 MEP1AQ16819 746 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms