RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 HMGA2P52926 109 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 FXYD6P3P58550 94 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 GK2Q14410 553 aaPredicted RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 GDF7Q7Z4P5 450 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 IQCF2Q8IXL9 164 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 SPACA7Q96KW9 195 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 PDCD1LG2Q9BQ51 273 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 POTEKPQ9BYX7 375 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 NXF2Q9GZY0 626 aaKnown RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 C20orf85Q9H1P6 137 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 TM7SF3Q9NS93 570 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ZNF443Q9Y2A4 671 aaPredicted RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 A0A1W2PP55 124 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ARRDC5A6NEK1 342 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ERVH48-1M5A8F1 160 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 FCMRO60667 390 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 RLN2P04090 185 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 LIMS3P0CW19 117 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 LIMS4P0CW20 117 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 PER3P56645 1201 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 RAP2BP61225 183 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 LSM11P83369 360 aaKnown RBP eCLIP9.82□□□□□ -0.84
USB1-212ENST00000566082 C1orf94Q6P1W5 598 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 RNF165Q6ZSG1 346 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 MBOAT2Q6ZWT7 520 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 SLC35F2Q8IXU6 374 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 OR2L5Q8NG80 312 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 OR10H5Q8NGA6 315 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ANGPTL6Q8NI99 470 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 ZFPM2Q8WW38 1151 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 C5orf34Q96MH7 638 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 C7orf50Q9BRJ6 194 aaKnown RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 RXFP3Q9NSD7 469 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 WSB2Q9NYS7 404 aaPredicted RBP9.82□□□□□ -0.84
USB1-212ENST00000566082 FBXL2Q9UKC9 423 aa9.82□□□□□ -0.84
USB1-212ENST00000566082 C11orf98E9PRG8 122 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 ACOT7O00154 380 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 FFAR1O14842 300 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 FPR3P25089 353 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 PDX1P52945 283 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 PRDX1Q06830 199 aaKnown RBP9.81□□□□□ -0.84
USB1-212ENST00000566082 ILF3Q12906 894 aaKnown RBP eCLIP9.81□□□□□ -0.848e-15■■■□□ 19
USB1-212ENST00000566082 PDE7AQ13946 482 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 PDGFRLQ15198 375 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 OR1Q1Q15612 314 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 DUSP6Q16828 381 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 GFOD2Q3B7J2 385 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 MRPL2Q5T653 305 aaKnown RBP9.81□□□□□ -0.84
USB1-212ENST00000566082 KIAA1211LQ6NV74 962 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 LEG1Q6P5S2 330 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 LAS2Q8IYD9 372 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 ZNF454Q8N9F8 522 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 UCN3Q969E3 161 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 GPR174Q9BXC1 333 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 Q9N2J8 555 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 FZD3Q9NPG1 666 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 MED17Q9NVC6 651 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 GRHPRQ9UBQ7 328 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 A4GNTQ9UNA3 340 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 V9GY05 133 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 ZNF705EA8MWA4 302 aaPredicted RBP9.81□□□□□ -0.84
USB1-212ENST00000566082 LDB3O75112 727 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 NDUFB2O95178 105 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 AMY2AP04746 511 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 PVALBP20472 110 aaPredicted RBP9.81□□□□□ -0.84
USB1-212ENST00000566082 CD79BP40259 229 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 SLC7A9P82251 487 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 SCRN3Q0VDG4 424 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 NOGQ13253 232 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 FGL2Q14314 439 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 MNTQ99583 582 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 MED18Q9BUE0 208 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 LTBP1Q14766 1721 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 NAP1L6A6NFF2 107 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 EEF1E1-BLOC1S5C9J1V9 151 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 APODP05090 189 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 ZNF823P16415 610 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 FUT1P19526 365 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 NUDT1P36639 197 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 HCCSP53701 268 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 SORDQ00796 357 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 NKPD1Q17RQ9 610 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 FAAP20Q6NZ36 180 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 CAMKMTQ7Z624 323 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 ZBTB44Q8NCP5 570 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 TMEM185AQ8NFB2 350 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 TNFRSF13CQ96RJ3 184 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 MARVELD1Q9BSK0 173 aa9.81□□□□□ -0.84
USB1-212ENST00000566082 FGF20Q9NP95 211 aaPredicted RBP9.81□□□□□ -0.84
USB1-212ENST00000566082 CHP2O43745 196 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ZNF888P0CJ79 500 aaPredicted RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 TFPIP10646 304 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 ANXA7P20073 488 aaKnown RBP9.8□□□□□ -0.84
USB1-212ENST00000566082 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.849e-16■■■■■ 106.3
USB1-212ENST00000566082 CCKBRP32239 447 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 PRKXP51817 358 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 CEBPGP53567 150 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 SHC2P98077 582 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 FOXK2Q01167 660 aa9.8□□□□□ -0.84
USB1-212ENST00000566082 HACD4Q5VWC8 232 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms