RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 FADDQ13158 208 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 MAPK11Q15759 364 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 CYP51A1Q16850 503 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 EXOC3L2Q2M3D2 409 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 LIN52Q52LA3 116 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 LRIF1Q5T3J3 769 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 FBXW10Q5XX13 1052 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 VWA1Q6PCB0 445 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 ZNF836Q6ZNA1 936 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 PLEKHM3Q6ZWE6 761 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 LURAP1LQ8IV03 231 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 MSRB3Q8IXL7 192 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 METTL25Q8N6Q8 603 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 RNF217Q8TC41 542 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 MRGPRX4Q96LA9 322 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 TREX2Q9BQ50 279 aaPredicted RBP9.92□□□□□ -0.82
DDB1-222ENST00000543627 ZNF559Q9BR84 538 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 SFXN3Q9BWM7 321 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 ARMC7Q9H6L4 198 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 SLC52A3Q9NQ40 469 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 CTPS2Q9NRF8 586 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 ARMCX1Q9P291 453 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 KLHL14Q9P2G3 628 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 ZNF443Q9Y2A4 671 aaPredicted RBP9.92□□□□□ -0.82
DDB1-222ENST00000543627 A0A1W2PNV4 684 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 C7orf72A4D263 438 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 CFAP73A6NFT4 308 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 FRS3O43559 492 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 PGM3O95394 542 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 GUSBP08236 651 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 NID1P14543 1247 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 UQCRBP14927 111 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 KIR2DL3P43628 341 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 DLX5P56178 289 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 COPZ1P61923 177 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 HOXC5Q00444 222 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 CDK6Q00534 326 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 TFF3Q07654 80 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 SELENBP1Q13228 472 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 SCARB2Q14108 478 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 SELPLGQ14242 412 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 RUNDC3AQ59EK9 446 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 DLEU7Q6UYE1 221 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 GDF7Q7Z4P5 450 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 BTLAQ7Z6A9 289 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 CPLX4Q7Z7G2 160 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 ADGRE4PQ86SQ3 457 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 RETREG3Q86VR2 466 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 SNX32Q86XE0 403 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 ZZZ3Q8IYH5 903 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 C10orf111Q8N326 155 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 CLIP4Q8N3C7 705 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 BBS10Q8TAM1 723 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 LINC01560Q8TB33 94 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 ST8SIA1Q92185 356 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 RNASE6Q93091 150 aaKnown RBP9.91□□□□□ -0.82
DDB1-222ENST00000543627 ZNF775Q96BV0 537 aaPredicted RBP9.91□□□□□ -0.82
DDB1-222ENST00000543627 ZFP3Q96NJ6 502 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 CGREF1Q99674 301 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 SRXN1Q9BYN0 137 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 OPN3Q9H1Y3 402 aaPredicted RBP9.91□□□□□ -0.82
DDB1-222ENST00000543627 IKZF5Q9H5V7 419 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 ZNF385DQ9H6B1 395 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 C12orf49Q9H741 205 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 A4GALTQ9NPC4 353 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 SAR1AQ9NR31 198 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 ACER3Q9NUN7 267 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 TMEM45AQ9NWC5 275 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 PAQR5Q9NXK6 330 aaPredicted RBP9.91□□□□□ -0.82
DDB1-222ENST00000543627 DNAJB12Q9NXW2 375 aaKnown RBP9.91□□□□□ -0.82
DDB1-222ENST00000543627 SLC13A4Q9UKG4 626 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 PACSIN3Q9UKS6 424 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 PROCRQ9UNN8 238 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 CORO2BQ9UQ03 480 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 IFT52Q9Y366 437 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 ZNF175Q9Y473 711 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 CACNA1CQ13936 2221 aa9.91□□□□□ -0.82
DDB1-222ENST00000543627 TMED7-TICAM2A0A0A6YYA0 188 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 SULT2B1O00204 365 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 SYT5O00445 386 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 MRASO14807 208 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 ADAMDEC1O15204 470 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 ADAM11O75078 769 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 IL18BPO95998 194 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 PABPC4LP0CB38 370 aaKnown RBP9.9□□□□□ -0.82
DDB1-222ENST00000543627 FCGR2AP12318 317 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 CXCR1P25024 350 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 ELK4P28324 431 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 TACR3P29371 465 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 APOBEC1P41238 236 aaKnown RBP9.9□□□□□ -0.82
DDB1-222ENST00000543627 MAGEA8P43361 318 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 OR2B6P58173 313 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 GNGT1P63211 74 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 TLE4Q04727 773 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 CYLC2Q14093 348 aaPredicted RBP9.9□□□□□ -0.82
DDB1-222ENST00000543627 MAPRE2Q15555 327 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 CTU2Q2VPK5 515 aaKnown RBP9.9□□□□□ -0.82
DDB1-222ENST00000543627 REP15Q6BDI9 236 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 GTF2IRD2BQ6EKJ0 949 aa9.9□□□□□ -0.82
DDB1-222ENST00000543627 ALKBH2Q6NS38 261 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms