RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
HDAC1-206ENST00000476391 PNLIPRP2P54317 469 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 CDH4P55283 916 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 PTSQ03393 145 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 CSRP2Q16527 193 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ZDHHC20Q5W0Z9 365 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 RAB12Q6IQ22 244 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ZCCHC12Q6PEW1 402 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 FAM111BQ6SJ93 734 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 CMTM4Q8IZR5 234 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 SIRT6Q8N6T7 355 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 POMGNT2Q8NAT1 580 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ACOT11Q8WXI4 607 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-206ENST00000476391 OSTF1Q92882 214 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 C14orf144Q96I85 54 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 TIMP4Q99727 224 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 MAP3K3Q99759 626 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 C16orf70Q9BSU1 422 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 SPATC1LQ9H0A9 340 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 MAGEH1Q9H213 219 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 TMEM185BQ9H7F4 350 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 KLK11Q9UBX7 282 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 TTC3P53804 2025 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 HELZP42694 1942 aaKnown RBP12.85□□□□□ -0.35
HDAC1-206ENST00000476391 TRAV14DV4A0A0A6YYC5 116 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 TRBV5-4A0A0C4DH59 114 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 A0A0D9SEW6 157 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 FLRT2O43155 660 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 SLC34A2O95436 690 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
HDAC1-206ENST00000476391 POMCP01189 267 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 F11P03951 625 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 UQCRC2P22695 453 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 RAB4BP61018 213 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 AP1S1P61966 158 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 SSX2Q16385 188 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 ACSM3Q53FZ2 586 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 C11orf88Q6PI97 169 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 RNASE11Q8TAA1 199 aaKnown RBP12.85□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 TNFAIP8L1Q8WVP5 186 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 EID2BQ96D98 161 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 ART5Q96L15 291 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF607Q96SK3 696 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 PINK1Q9BXM7 581 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 TMEM138Q9NPI0 162 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 UQCC1Q9NVA1 299 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 CACNG4Q9UBN1 327 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 PLXNA3P51805 1871 aa12.85□□□□□ -0.35
HDAC1-206ENST00000476391 GAPDHSO14556 408 aaPredicted RBP12.84□□□□□ -0.35
HDAC1-206ENST00000476391 SEPT4O43236 478 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 FMO6PO60774 539 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 IFNGP01579 166 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 IL3P08700 152 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 PFN3P60673 137 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 TSPAN31Q12999 210 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 GRHL2Q6ISB3 625 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 FAM83HQ6ZRV2 1179 aaPredicted RBP12.84□□□□□ -0.35
HDAC1-206ENST00000476391 DMRTC2Q8IXT2 367 aaPredicted RBP12.84□□□□□ -0.35
HDAC1-206ENST00000476391 APCDD1Q8J025 514 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 WFDC6Q9BQY6 131 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
HDAC1-206ENST00000476391 XKR8Q9H6D3 395 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 PPP4R1LQ9P1A2 415 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 NPIPB9F8W1W9 429 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 POP4O95707 220 aaKnown RBP12.84□□□□□ -0.35
HDAC1-206ENST00000476391 LATS1O95835 1130 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 MT-ND5P03915 603 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 OR8U8P0C7N1 319 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 TBXA2RP21731 343 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC1-206ENST00000476391 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 ABHD13Q7L211 337 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 TMEM200AQ86VY9 491 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 SCN4BQ8IWT1 228 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 MUC20Q8N307 709 aaPredicted RBP12.84□□□□□ -0.35
HDAC1-206ENST00000476391 LNX2Q8N448 690 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 OR51G2Q8NGK0 314 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 LGALS14Q8TCE9 139 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 PRRC1Q96M27 445 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 ZFP42Q96MM3 310 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF75AQ96N20 296 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 AP5M1Q9H0R1 490 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 CHRDQ9H2X0 955 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 OR51I1Q9H343 314 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 NLRC5Q86WI3 1866 aa12.84□□□□□ -0.35
HDAC1-206ENST00000476391 OR6C76A6NM76 312 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF879B4DU55 563 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 MAN2B1O00754 1011 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 MT-ND4LP03901 98 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 RD3LP0DJH9 198 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 HPGDP15428 266 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 TYMPP19971 482 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 CERS1P27544 350 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 FAUP35544 74 aaKnown RBP12.83□□□□□ -0.35
HDAC1-206ENST00000476391 AHRP35869 848 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 NRG3P56975 720 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms