RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TBXA2RP21731 343 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CRYGSP22914 178 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 APEX1P27695 318 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 LOXP28300 417 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 SHC1P29353 583 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 NTSP30990 170 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CCKARP32238 428 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CRHR1P34998 444 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 MAP3K8P41279 467 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CCT5P48643 541 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 NR1H2P55055 460 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 EEFSECP57772 596 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 DNAJB13P59910 316 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 RPS3AP61247 264 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 RPL38P63173 70 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 MRPS22P82650 360 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 SLC18A2Q05940 514 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNHIT3Q15649 155 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 TSC22D1Q15714 1073 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CD226Q15762 336 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 ACKR1Q16570 336 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 DUSP5Q16690 384 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 TMEM44Q2T9K0 475 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CTU2Q2VPK5 515 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 GALNTL6Q49A17 601 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 Q5PR19 223 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 SHEQ5VZ18 495 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 OR2A2Q6IF42 318 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 LRIG3Q6UXM1 1119 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 YTHDF3Q7Z739 585 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 GGNQ86UU5 652 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 METTL25Q8N6Q8 603 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 ATP6V1C2Q8NEY4 427 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 OR7A2PQ8NGA2 310 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 OR5AN1Q8NGI8 311 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 OR10D3Q8NH80 312 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 KIF18AQ8NI77 898 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 POC1BQ8TC44 478 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 AGR3Q8TD06 166 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 OSTF1Q92882 214 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 ZBTB9Q96C00 473 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF524Q96C55 264 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 PPCDCQ96CD2 204 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CCDC126Q96EE4 140 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 ARSGQ96EG1 525 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 GIMAP5Q96F15 307 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CHMP6Q96FZ7 201 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 SH3YL1Q96HL8 342 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 MARK4Q96L34 752 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 LRGUKQ96M69 825 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 Q96MF0 132 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 RNF145Q96MT1 663 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CCL19Q99731 98 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 SLC39A3Q9BRY0 314 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 GATA5Q9BWX5 397 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 BTBD2Q9BX70 525 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 REEP4Q9H6H4 257 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 RNF122Q9H9V4 155 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 LRTM1Q9HBL6 345 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 RRAGDQ9NQL2 400 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 PLSCR4Q9NRQ2 329 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 BEX4Q9NWD9 120 aaPredicted RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 C1orf109Q9NX04 203 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 FAM120CQ9NX05 1096 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 GIN1Q9NXP7 522 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 FAM53CQ9NYF3 392 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 ELOVL5Q9NYP7 299 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF226Q9NYT6 803 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 MRTO4Q9UKD2 239 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CDC42EP3Q9UKI2 254 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 PROCRQ9UNN8 238 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 STK38LQ9Y2H1 464 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 DNAJC15Q9Y5T4 150 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 GPR45Q9Y5Y3 372 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 AP4B1Q9Y6B7 739 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 KCNE3Q9Y6H6 103 aa4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 CHD3Q12873 2000 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-208ENST00000455546 HRNRQ86YZ3 2850 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 UQCRHLA0A096LP55 91 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 IGHV3-15A0A0B4J1V0 119 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 A0A1W2PRB8 838 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 NPIPB8E9PQR5 432 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 COPEO14579 308 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 AZIN1O14977 448 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ARHGEF9O43307 516 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 RGS14O43566 566 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 TRIM13O60858 407 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PEX11AO75192 247 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SPAG7O75391 227 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 NKX2-2O95096 273 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SLU7O95391 586 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 OXSR1O95747 527 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 PLGP00747 810 aaPredicted RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 HMGN2P05204 90 aaKnown RBP4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 ALOX5P09917 674 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 LAMP1P11279 417 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 HPGDP15428 266 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 CREB1P16220 341 aa4.18□□□□□ -1.74
GTF3C3-208ENST00000455546 SDC1P18827 310 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms