RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CTAG2O75638 210 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 ANXA5P08758 320 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 FGF3P11487 239 aaPredicted RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 TBPL1P62380 186 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 MPPED2Q15777 294 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 CPSF6Q16630 551 aaKnown RBP eCLIP11.23□□□□□ -0.615e-6■■□□□ 12.7
SRRT-216ENST00000618262 ARL13AQ5H913 290 aaPredicted RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 ZNF468Q5VIY5 522 aaPredicted RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 GUSBP11Q6P575 273 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 ZNF740Q8NDX6 193 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SCARF2Q96GP6 870 aaPredicted RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 SLC38A3Q99624 504 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SLC12A9Q9BXP2 914 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SLAMF7Q9NQ25 335 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 GPR27Q9NS67 375 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SEMA4GQ9NTN9 838 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 PNPOQ9NVS9 261 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 FAM120CQ9NX05 1096 aaKnown RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 UBQLN2Q9UHD9 624 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 CLEC2DQ9UHP7 191 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 GPR160Q9UJ42 338 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 KNTC1P50748 2209 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 GFYI3L273 518 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SOX30O94993 753 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SERPIND1P05546 499 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 PPP2R1BP30154 601 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SERPINF1P36955 418 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 UBE2G2P60604 165 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 MED22Q15528 200 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SF1Q15637 639 aaKnown RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 ACTBL2Q562R1 376 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 XAF1Q6GPH4 301 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 NRARPQ7Z6K4 114 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 TMEM17Q86X19 198 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 GKN2Q86XP6 184 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 MARCH9Q86YJ5 346 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 CDYL2Q8N8U2 506 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 RCBTB1Q8NDN9 531 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 OR10A7Q8NGE5 316 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 OR52M1Q8NGK5 317 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 HYLS1Q96M11 299 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 ATP6V0BQ99437 205 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SRMSQ9H3Y6 488 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 OXSMQ9NWU1 459 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 SMPD3Q9NY59 655 aaPredicted RBP11.23□□□□□ -0.61
SRRT-216ENST00000618262 BTRCQ9Y297 605 aa11.23□□□□□ -0.61
SRRT-216ENST00000618262 E7EQ34 232 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 PGRMC2O15173 223 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 TRIM13O60858 407 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 RFPL3O75679 317 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 IFNA2P01563 188 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 ALPLP05186 524 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 GIMD1P0DJR0 217 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 AMD1P17707 334 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 TEAD1P28347 426 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 EPHA8P29322 1005 aaPredicted RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 CNR2P34972 360 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 KCNJ3P48549 501 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 NUDT6P53370 316 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 PRAMEF20Q5VT98 475 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 CXXC5Q7LFL8 322 aaKnown RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 GDPD1Q8N9F7 314 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 NDNFQ8TB73 568 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 DYNC2LI1Q8TCX1 351 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 RHBDD1Q8TEB9 315 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 FAR1Q8WVX9 515 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 PRAP1Q96NZ9 151 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 OR4K3Q96R72 315 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 SORT1Q99523 831 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 PCED1AQ9H1Q7 454 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 SEBOXQ9HB31 216 aaPredicted RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 POPDC3Q9HBV1 291 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 MID1IP1Q9NPA3 183 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 HRASLS2Q9NWW9 162 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 ICKQ9UPZ9 632 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 OARD1Q9Y530 152 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 ADAMDEC1O15204 470 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 RNH1P13489 461 aaKnown RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 ZNF25P17030 456 aaPredicted RBP11.22□□□□□ -0.61
SRRT-216ENST00000618262 S100A7P31151 101 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 CDKN1BP46527 198 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 GFERP55789 205 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 MERTKQ12866 999 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 GBX1Q14549 363 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 RPS6KA2Q15349 733 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 DEFB110Q30KQ9 67 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 UNC50Q53HI1 259 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 C16orf89Q6UX73 402 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 TMPRSS11BQ86T26 416 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 IQCHQ86VS3 1027 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 FAM129CQ86XR2 697 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 C9orf62Q8N4C0 152 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 SAP25Q8TEE9 199 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 SLC45A3Q96JT2 553 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 MRGPRX4Q96LA9 322 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 APOLD1Q96LR9 279 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 TOLLIPQ9H0E2 274 aa11.22□□□□□ -0.61
SRRT-216ENST00000618262 IPPKQ9H8X2 491 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms