RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PRR14LQ5THK1 2151 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 A0A1W2PP18 115 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 ZNF724A8MTY0 619 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 CLOCKO15516 846 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 ZNF264O43296 627 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 EFNA2O43921 213 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 IFNA2P01563 188 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 OR3A2P47893 321 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 KRTAP1-1Q07627 177 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 DMTNQ08495 405 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 ZNF844Q08AG5 666 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 VEZF1Q14119 521 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 UGT3A2Q3SY77 523 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 SPDYE7PQ495Y7 208 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 ATP6AP1LQ52LC2 224 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 ARL13AQ5H913 290 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 CBLN3Q6UW01 205 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 BHLHA15Q7RTS1 189 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 LILRB1Q8NHL6 650 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 CLHC1Q8NHS4 586 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 RAB3IL1Q8TBN0 382 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 TWIST2Q8WVJ9 160 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 NANOS1Q8WY41 292 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 TMEM234Q8WY98 164 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 ST8SIA1Q92185 356 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 SRXN1Q9BYN0 137 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 BHLHE41Q9C0J9 482 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 NMUR2Q9GZQ4 415 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 ALG2Q9H553 416 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 FIS1Q9Y3D6 152 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 PTGDR2Q9Y5Y4 395 aa15.82■□□□□ 0.12
SHKBP1-227ENST00000602011 NPIPB9F8W1W9 429 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 LAMP1P11279 417 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 ENPP1P22413 925 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 MAD2L1Q13257 205 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 PCLAFQ15004 111 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 PDK3Q15120 406 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 NRF1Q16656 503 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 TIMM23BQ5SRD1 257 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 C1QTNF12Q5T7M4 302 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 C3orf33Q6P1S2 294 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 UBLCP1Q8WVY7 318 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 RHOXF2Q9BQY4 288 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 LAT2Q9GZY6 243 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 GPATCH2Q9NW75 528 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 MGAT4BQ9UQ53 548 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 LIPT1Q9Y234 373 aa15.81■□□□□ 0.12
SHKBP1-227ENST00000602011 ZNF814B7Z6K7 855 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 CYTIPO60759 359 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 DNAJA2O60884 412 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 AGR2O95994 175 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 THBS1P07996 1170 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 GUSBP08236 651 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 SOD3P08294 240 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 SHC1P29353 583 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 CSNK2A1P68400 391 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 RASGEF1BQ0VAM2 473 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 ALKBH2Q6NS38 261 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 PODNL1Q6PEZ8 512 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 GALNT5Q7Z7M9 940 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 RIBC1Q8N443 379 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 OR7A2PQ8NGA2 310 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 SLC25A43Q8WUT9 341 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 PSD2Q9BQI7 771 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 TRIM2Q9C040 744 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 SLCO5A1Q9H2Y9 848 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 COQ10BQ9H8M1 238 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 EMC3Q9P0I2 261 aa15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 SPIN1Q9Y657 262 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 CHD3Q12873 2000 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-227ENST00000602011 DPRXA6NFQ7 191 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 SERINC4A6NH21 518 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 RNF223E7ERA6 249 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 PIP5K1BO14986 540 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 STX11O75558 287 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 PGM3O95394 542 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 SHBGP04278 402 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 UBL4AP11441 157 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 C21orf58P58505 322 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 DSCR9P59020 149 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 PPA1Q15181 289 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 QPRTQ15274 297 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 ZNF141Q15928 474 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 SMU1Q2TAY7 513 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 XKR7Q5GH72 579 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 C6orf136Q5SQH8 315 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 AGAP6Q5VW22 663 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 DTX2Q86UW9 622 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 HS6ST2Q96MM7 605 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 ZIM3Q96PE6 472 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 SDF2Q99470 211 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 CXorf36Q9H7Y0 433 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 CISD1Q9NZ45 108 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 MXRA5Q9NR99 2828 aa15.79■□□□□ 0.12
SHKBP1-227ENST00000602011 CUBNO60494 3623 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 GOLGA8QA0A0J9YX86 632 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 GOLGA8OA6NCC3 632 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 GOLGA8NF8WBI6 632 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 ANKRD28O15084 1053 aa15.78■□□□□ 0.12
SHKBP1-227ENST00000602011 CFLARO15519 480 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms