RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 WBP2NLQ6ICG8 309 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 TSSK4Q6SA08 328 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 ZAR1Q86SH2 424 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 SLCO6A1Q86UG4 719 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 IQCF1Q8N6M8 205 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 FAM71CQ8NEG0 241 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 OR4N2Q8NGD1 307 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 OR52I1Q8NGK6 324 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 OR8D4Q8NGM9 314 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 OR1N1Q8NGS0 311 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 FANK1Q8TC84 345 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 DYNC2LI1Q8TCX1 351 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 PIGKQ92643 395 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 TP53INP1Q96A56 240 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 RNFT2Q96EX2 444 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 SAMD8Q96LT4 415 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 NDEL1Q9GZM8 345 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 LAT2Q9GZY6 243 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 UBQLN3Q9H347 655 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 DSN1Q9H410 356 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 HHATLQ9HCP6 504 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 HMG20AQ9NP66 347 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 INPP5EQ9NRR6 644 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 DHCR7Q9UBM7 475 aaKnown RBP9.57□□□□□ -0.88
VPS25-203ENST00000589520 OSGIN1Q9UJX0 560 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 SLC6A14Q9UN76 642 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 SIGLEC7Q9Y286 467 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 B3GNT3Q9Y2A9 372 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 LSM2Q9Y333 95 aaKnown RBP9.57□□□□□ -0.88
VPS25-203ENST00000589520 PCDHGB6Q9Y5F9 930 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 PCDHGA3Q9Y5H0 932 aa9.57□□□□□ -0.88
VPS25-203ENST00000589520 TDRD6O60522 2096 aaKnown RBP9.57□□□□□ -0.88
VPS25-203ENST00000589520 CPED1A4D0V7 1026 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 SLC22A31A6NKX4 558 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 A8MU76 341 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 CLDN25C9JDP6 229 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 M0R129 80 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 GTPBP1O00178 669 aaKnown RBP9.56□□□□□ -0.88
VPS25-203ENST00000589520 BHLHE40O14503 412 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 SIGLEC6O43699 453 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 HYAL3O43820 417 aaPredicted RBP9.56□□□□□ -0.88
VPS25-203ENST00000589520 IDH3BO43837 385 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 EIF4E2O60573 245 aaKnown RBP9.56□□□□□ -0.88
VPS25-203ENST00000589520 DDAH2O95865 285 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 INHBBP09529 407 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 UBL4AP11441 157 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 HK1P19367 917 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 PAICSP22234 425 aaKnown RBP9.56□□□□□ -0.88
VPS25-203ENST00000589520 LIMK1P53667 647 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 CDH11P55287 796 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 PRPS1P60891 318 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 VBP1P61758 197 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 DCDP81605 110 aaKnown RBP9.56□□□□□ -0.88
VPS25-203ENST00000589520 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
VPS25-203ENST00000589520 ACSM1Q08AH1 577 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 CLEC12AQ5QGZ9 265 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 SLC30A6Q6NXT4 461 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 TUBA3EQ6PEY2 450 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 ZC3H14Q6PJT7 736 aaKnown RBP9.56□□□□□ -0.88
VPS25-203ENST00000589520 MISPQ8IVT2 679 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 SHISA5Q8N114 240 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 OR4Q3Q8NH05 313 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 RNF217Q8TC41 542 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 LIPHQ8WWY8 451 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 ADIPOR1Q96A54 375 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 SGTBQ96EQ0 304 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 COQ7Q99807 217 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 NUDT22Q9BRQ3 303 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 TMEM43Q9BTV4 400 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 TAPBPLQ9BX59 468 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 DPH1Q9BZG8 443 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 OR8D2Q9GZM6 311 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 DCSTAMPQ9H295 470 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 GAREM1Q9H706 876 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 FBXO8Q9NRD0 319 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 CMC2Q9NRP2 79 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 FLRT3Q9NZU0 649 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 CCDC59Q9P031 241 aaKnown RBP9.56□□□□□ -0.88
VPS25-203ENST00000589520 KLHL21Q9UJP4 597 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 DTX4Q9Y2E6 619 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 NTNG1Q9Y2I2 539 aa9.56□□□□□ -0.88
VPS25-203ENST00000589520 LY6G6EA0A0G2JKS1 128 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 RIIAD1A6NNX1 92 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 CDC42EP2O14613 210 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 ZNF264O43296 627 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 PIP5K1CO60331 668 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 CSO75390 466 aaKnown RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 NDUFB2O95178 105 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 NADKO95544 446 aaPredicted RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 HSMCR30P0CW71 290 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 SAGP10523 405 aaPredicted RBP9.55□□□□□ -0.88
VPS25-203ENST00000589520 CKMT1AP12532 417 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 PEPDP12955 493 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 ZNF12P17014 697 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 MAKP20794 623 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 IL12BP29460 328 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 SOX6P35712 828 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 ENTPD1P49961 510 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 GAS1P54826 345 aa9.55□□□□□ -0.88
VPS25-203ENST00000589520 WNT4P56705 351 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms