RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 RASL10BQ96S79 203 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 PRSS27Q9BQR3 290 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 GABARAPL3Q9BY60 117 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 TBL1XR1Q9BZK7 514 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 ZNF556Q9HAH1 456 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 TMEM27Q9HBJ8 222 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 P4HTMQ9NXG6 502 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 A0A0B4J2E0 115 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 A0A1B0GX12 115 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 GTPBP1O00178 669 aaKnown RBP19.05■□□□□ 0.64
PNKP-203ENST00000593946 SLC16A6O15403 523 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 OIP5O43482 229 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 GFRA3O60609 400 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 DXOO77932 396 aaKnown RBP19.05■□□□□ 0.64
PNKP-203ENST00000593946 CLIC3O95833 236 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 FBXO45P0C2W1 286 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 ENDOUP21128 410 aaKnown RBP19.05■□□□□ 0.64
PNKP-203ENST00000593946 MARCH3Q86UD3 253 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 ARMC10Q8N2F6 343 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 IL22RA1Q8N6P7 574 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 ZNF555Q8NEP9 628 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 ADAMTS17Q8TE56 1095 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 RNF138Q8WVD3 245 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 GTPBP3Q969Y2 492 aaKnown RBP19.05■□□□□ 0.64
PNKP-203ENST00000593946 DGCR6LQ9BY27 220 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 GRIP2Q9C0E4 1043 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 RIBC2Q9H4K1 309 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 IL17BQ9UHF5 180 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 CARD8Q9Y2G2 431 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 PCDHGB5Q9Y5G0 923 aa19.05■□□□□ 0.64
PNKP-203ENST00000593946 EML6Q6ZMW3 1958 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 A0A1B0GWA3 101 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 ADAM10O14672 748 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 NDUFB5O43674 189 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 POU2F1P14859 743 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 LSM11P83369 360 aaKnown RBP eCLIP19.04■□□□□ 0.641e-11■■■■■ 50.1
PNKP-203ENST00000593946 Q0VFX4 171 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 CBLN3Q6UW01 205 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 NUP54Q7Z3B4 507 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 RAB43Q86YS6 212 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 APLFQ8IW19 511 aaPredicted RBP19.04■□□□□ 0.64
PNKP-203ENST00000593946 PARP8Q8N3A8 854 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 OR5M3Q8NGP4 307 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 GRHL3Q8TE85 626 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 TTC9Q92623 222 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 TMCO6Q96DC7 493 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 NODALQ96S42 347 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 LAT2Q9GZY6 243 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 MPDZO75970 2070 aa19.04■□□□□ 0.64
PNKP-203ENST00000593946 LOC100130705A0A1B0GUX0 176 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 E9PQ18 207 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 MASP2O00187 686 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 ITGA10O75578 1167 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 NTN1O95631 604 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 RYKP34925 604 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 UGT2B15P54855 530 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 ZNF117Q03924 483 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 NPRL3Q12980 569 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 CHAF1BQ13112 559 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 NTRK2Q16620 822 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 C1orf94Q6P1W5 598 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 KLHL17Q6TDP4 642 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 UGT2A3Q6UWM9 527 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 ZNF730Q6ZMV8 503 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 WDR88Q6ZMY6 472 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 ZER1Q7Z7L7 766 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 TMEM255BQ8WV15 326 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 SPACA9Q96E40 222 aaPredicted RBP19.03■□□□□ 0.64
PNKP-203ENST00000593946 CHP2O43745 196 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 ANGPTL1O95841 491 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 EPHA2P29317 976 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 GATA6Q92908 595 aa19.03■□□□□ 0.64
PNKP-203ENST00000593946 YARS2Q9Y2Z4 477 aaKnown RBP19.03■□□□□ 0.64
PNKP-203ENST00000593946 SCO2O43819 266 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 EIF4E2O60573 245 aaKnown RBP19.02■□□□□ 0.63
PNKP-203ENST00000593946 LINGO3P0C6S8 592 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 SOX3P41225 446 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 CAMK2BQ13554 666 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 ATP1A4Q13733 1029 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 ZNF791Q3KP31 576 aaPredicted RBP19.02■□□□□ 0.63
PNKP-203ENST00000593946 CD300LDQ6UXZ3 194 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 MBOAT2Q6ZWT7 520 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 TMCO5AQ8N6Q1 288 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 MUS81Q96NY9 551 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 GPN2Q9H9Y4 310 aaPredicted RBP19.02■□□□□ 0.63
PNKP-203ENST00000593946 ENOPH1Q9UHY7 261 aa19.02■□□□□ 0.63
PNKP-203ENST00000593946 BCKDKO14874 412 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 HCRTR2O43614 444 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 MAN1A2O60476 641 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 SERPINA7P05543 415 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 IFNGR2P38484 337 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 CLK3P49761 638 aaKnown RBP19.01■□□□□ 0.63
PNKP-203ENST00000593946 MLF1P58340 268 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 COPZ1P61923 177 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 ALG10BQ5I7T1 473 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 SWT1Q5T5J6 900 aaKnown RBP19.01■□□□□ 0.63
PNKP-203ENST00000593946 KRT80Q6KB66 452 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 H3F3CQ6NXT2 135 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 ULK3Q6PHR2 472 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 RRM2BQ7LG56 351 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms