RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SLC25A36Q96CQ1 311 aa9.85□□□□□ -0.83
USB1-212ENST00000566082 WDFY2Q96P53 400 aa9.85□□□□□ -0.83
USB1-212ENST00000566082 HINT3Q9NQE9 182 aaKnown RBP9.85□□□□□ -0.83
USB1-212ENST00000566082 ACOXLQ9NUZ1 547 aa9.85□□□□□ -0.83
USB1-212ENST00000566082 SOHLH2Q9NX45 425 aa9.85□□□□□ -0.83
USB1-212ENST00000566082 SH2B3Q9UQQ2 575 aa9.85□□□□□ -0.83
USB1-212ENST00000566082 CCL26Q9Y258 94 aa9.85□□□□□ -0.83
USB1-212ENST00000566082 SEC13P55735 322 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ACTA2P62736 377 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ACTG2P63267 376 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 DGCR2P98153 550 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 BAIAP2L2Q6UXY1 529 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 GAREM2Q75VX8 874 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ATCAYQ86WG3 371 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 FOXRED2Q8IWF2 684 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 THAP6Q8TBB0 222 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 LGALS14Q8TCE9 139 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 SMAP2Q8WU79 429 aaPredicted RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 RBPMSQ93062 196 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 KCTD12Q96CX2 325 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 TRMT2BQ96GJ1 504 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 AMDHD1Q96NU7 426 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 SEC22CQ9BRL7 303 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 MS4A8Q9BY19 250 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 MFFQ9GZY8 342 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 CHST8Q9H2A9 424 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 EMC7Q9NPA0 242 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 LAMP5Q9UJQ1 280 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 EXO1Q9UQ84 846 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 A0A0B4J203 849 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 SLC5A10A0PJK1 596 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 TRABD2BA6NFA1 517 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 A8MVJ9 347 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 STK25O00506 426 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 GAPDHSO14556 408 aaPredicted RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 RHOP08100 348 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 PSMB1P20618 241 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 HTR1FP30939 366 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 EXOSC2Q13868 293 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 CRMP1Q14194 572 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 LTB4RQ15722 352 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 KLHL26Q53HC5 615 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 C18orf63Q68DL7 685 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 RPL13AP3Q6NVV1 102 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ENPP7Q6UWV6 458 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 DPPA4Q7L190 304 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 GET4Q7L5D6 327 aaPredicted RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 NRSN1Q8IZ57 195 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 BEST3Q8N1M1 668 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 CPXM2Q8N436 756 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 LINC01599Q8WXQ3 324 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 TRMT61AQ96FX7 289 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 SAMD11Q96NU1 681 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 GAL3ST4Q96RP7 486 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 UBQLN3Q9H347 655 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 NARFLQ9H6Q4 476 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 PELI2Q9HAT8 420 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 SEMA4GQ9NTN9 838 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 FKBP14Q9NWM8 211 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ASB6Q9NWX5 421 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ACSL5Q9ULC5 683 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 PLCL2Q9UPR0 1127 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 CKAP5Q14008 2032 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 TRAV18A0A075B6X5 111 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 CDC123O75794 336 aaPredicted RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 UBL3O95164 117 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ADRB3P13945 408 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 GABRB1P18505 474 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 HIST1H1TP22492 207 aaPredicted RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 BTG1P62324 171 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 TAGLNQ01995 201 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 CAMK2BQ13554 666 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ELAVL3Q14576 367 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 PUS10Q3MIT2 529 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 AMZ1Q400G9 498 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ARHGAP11AQ6P4F7 1023 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 PEG10Q86TG7 708 aaKnown RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 ZNF248Q8NDW4 579 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 ATG5Q9H1Y0 275 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 DPEP2Q9H4A9 486 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 PTTG3PQ9NZH4 202 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 RABL2AQ9UBK7 228 aaPredicted RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 PLEKHB1Q9UF11 243 aaPredicted RBP9.84□□□□□ -0.83
USB1-212ENST00000566082 IER3IP1Q9Y5U9 82 aa9.84□□□□□ -0.83
USB1-212ENST00000566082 CDHR4A6H8M9 788 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 K7ESM1 405 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 PLA2G10O15496 165 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 TMPRSS11DO60235 418 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 RAD1O60671 282 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 FGF19O95750 216 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 GUCA1AP43080 201 aaPredicted RBP9.83□□□□□ -0.84
USB1-212ENST00000566082 SWI5Q1ZZU3 235 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 C2orf27AQ580R0 203 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 ZBTB37Q5TC79 503 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 CD276Q5ZPR3 534 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 ABI3BPQ7Z7G0 1075 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 TPRA1Q86W33 373 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 TMEM99Q8N816 258 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 GPR32P1Q8NGA4 272 aa9.83□□□□□ -0.84
USB1-212ENST00000566082 OR52N1Q8NH53 320 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms