RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 OR51L1Q8NGJ5 315 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TMEM239Q8WW34 195 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ACOT11Q8WXI4 607 aaPredicted RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 TP53INP1Q96A56 240 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ZNF524Q96C55 264 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ART5Q96L15 291 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ZNF285Q96NJ3 590 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GFM1Q96RP9 751 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 CD180Q99467 661 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 STACQ99469 402 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TBX5Q99593 518 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SMAD5Q99717 465 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 FUZQ9BT04 418 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 DUSP23Q9BVJ7 150 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ERVMER34-1Q9H9K5 563 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TMEM27Q9HBJ8 222 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 PRDM9Q9NQV7 894 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SUSD2Q9UGT4 822 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 PSORS1C1Q9UIG5 152 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 HEATR5AQ86XA9 2040 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 CACNA1CQ13936 2221 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 A0A1B0GVG6 124 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SMIM30A4D0T7 59 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 PMS2P1A4D2B8 440 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 FITM1A5D6W6 292 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 IDSB3KWA1 339 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ARHGAP33O14559 1287 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ALOX12BO75342 701 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SEC14L2O76054 403 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 OXSR1O95747 527 aaPredicted RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 NGFRP08138 427 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TDGF1P13385 188 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ATP6V1E1P36543 226 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 MAP3K8P41279 467 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 PCYT1AP49585 367 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SLC37A1P57057 533 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 FUT7Q11130 342 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 DSG2Q14126 1118 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 NKAIN1Q4KMZ8 207 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 KLHL12Q53G59 568 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 EIPR1Q53HC9 387 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SLC27A4Q6P1M0 643 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 WDR74Q6RFH5 385 aaPredicted RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 KIRREL2Q6UWL6 708 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 THSD4Q6ZMP0 1018 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 MARCH3Q86UD3 253 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 LHFPL3Q86UP9 236 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GALNT15Q8N3T1 639 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ZFP41Q8N8Y5 198 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 DTWD2Q8NBA8 298 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 OR4Q3Q8NH05 313 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 NDNFQ8TB73 568 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GNPDA2Q8TDQ7 276 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 RHBDD1Q8TEB9 315 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 FBLIM1Q8WUP2 373 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TMEM203Q969S6 136 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 MUL1Q969V5 352 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 PLEKHA8Q96JA3 519 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 DHRS1Q96LJ7 313 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TNFRSF13CQ96RJ3 184 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 PRSS27Q9BQR3 290 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 OR51V1Q9H2C8 321 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ZNF768Q9H5H4 540 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 EXOSC4Q9NPD3 245 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 MEPEQ9NQ76 525 aaPredicted RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 PTTG2Q9NZH5 202 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 RPS6KB2Q9UBS0 482 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 RARRES3Q9UL19 164 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 FER1L5A0AVI2 2057 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZFHX2Q9C0A1 2572 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 hCG_2014768A0A024R1R8 64 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 IMPA2O14732 288 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 DSCR3O14972 297 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 HCRTR2O43614 444 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 DYRK3O43781 588 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CDC40O60508 579 aaKnown RBP eCLIP3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZNF354AO60765 605 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 ICOSLGO75144 302 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 DDAH2O95865 285 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OPN1LWP04000 364 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CLPSP04118 112 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CDK1P06493 297 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 HEXBP07686 556 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZGLP1P0C6A0 271 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CLUP10909 449 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 NOS3P29474 1203 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CSTF2P33240 577 aaKnown RBP eCLIP3.16□□□□□ -1.9
LIG4-205ENST00000614526 GRK5P34947 590 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 RORAP35398 523 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SOX3P41225 446 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ACAA2P42765 397 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 GCGRP47871 477 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ATP12AP54707 1039 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 GABARAPL2P60520 117 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 RPS7P62081 194 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 RHAGQ02094 409 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZNF91Q05481 1191 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 TSPAN31Q12999 210 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SERTAD2Q14140 314 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 NR1D2Q14995 579 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms