RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCDC9-204ENST00000599398 ATAD3BQ5T9A4 648 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 PPP4R4Q6NUP7 873 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 HDXQ7Z353 690 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 MAVSQ7Z434 540 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 GTPBP8Q8N3Z3 284 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-204ENST00000599398 CHDHQ8NE62 594 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-204ENST00000599398 LRRC8CQ8TDW0 803 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 XAGE5Q8WWM1 108 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 FIG4Q92562 907 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 MAELQ96JY0 434 aaKnown RBP20.36■□□□□ 0.85
CCDC9-204ENST00000599398 RNF145Q96MT1 663 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 CCDC115Q96NT0 180 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 PANX1Q96RD7 426 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 NPAS1Q99742 590 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 KLHDC3Q9BQ90 382 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 BTNL2Q9UIR0 455 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 DTNAQ9Y4J8 743 aa20.36■□□□□ 0.85
CCDC9-204ENST00000599398 EIF1AYO14602 144 aaKnown RBP20.35■□□□□ 0.85
CCDC9-204ENST00000599398 OIP5O43482 229 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 TNFRSF21O75509 655 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 STX11O75558 287 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 AGR2O95994 175 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 PEX19P40855 299 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 CPA2P48052 419 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 PON3Q15166 354 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 NDUFAF6Q330K2 333 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 ARHGAP11BQ3KRB8 267 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 PDZK1Q5T2W1 519 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 SAXO2Q658L1 398 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 OR2A2Q6IF42 318 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 OLIG3Q7RTU3 272 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 LUZP2Q86TE4 346 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 TMEM200AQ86VY9 491 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 ZZZ3Q8IYH5 903 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 TMCO5AQ8N6Q1 288 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 TRIML2Q8N7C3 387 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 RFWD2Q8NHY2 731 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 MIPOL1Q8TD10 442 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 DYDC1Q8WWB3 177 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 RAB8BQ92930 207 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 NEURL3Q96EH8 262 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 ZNF845Q96IR2 970 aaPredicted RBP20.35■□□□□ 0.85
CCDC9-204ENST00000599398 OR52B2Q96RD2 323 aa20.35■□□□□ 0.85
CCDC9-204ENST00000599398 NPIPB9F8W1W9 429 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 OPN1LWP04000 364 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 ME2P23368 584 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 EIF1AXP47813 144 aaKnown RBP20.34■□□□□ 0.85
CCDC9-204ENST00000599398 KHKP50053 298 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 P2RX1P51575 399 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 PDCD4Q53EL6 469 aaKnown RBP20.34■□□□□ 0.85
CCDC9-204ENST00000599398 CBLN3Q6UW01 205 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 KIF18BQ86Y91 864 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 METTL25Q8N6Q8 603 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 CNEP1R1Q8N9A8 125 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 GLB1L3Q8NCI6 653 aaPredicted RBP20.34■□□□□ 0.85
CCDC9-204ENST00000599398 FNDC9Q8TBE3 224 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 INPP5KQ9BT40 448 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 NMUR2Q9GZQ4 415 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 TMEM185BQ9H7F4 350 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 JKAMPQ9P055 326 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 MKLN1Q9UL63 735 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 USH1CQ9Y6N9 552 aa20.34■□□□□ 0.85
CCDC9-204ENST00000599398 CSMD2Q7Z408 3487 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 PDZD2O15018 2839 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 HEATR5AQ86XA9 2040 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 A0A1W2PNV4 684 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 C7orf72A4D263 438 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 CCDC154A6NI56 674 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 UBDO15205 165 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 FCMRO60667 390 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 SLC22A3O75751 556 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 UBL4AP11441 157 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 CCR4P51679 360 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 EEF1A1P68104 462 aaKnown RBP20.33■□□□□ 0.85
CCDC9-204ENST00000599398 LRRC74AQ0VAA2 488 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 GSTA3Q16772 222 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 EEF1A1P5Q5VTE0 462 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 ZNF621Q6ZSS3 439 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 GGNQ86UU5 652 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 POC1BQ8TC44 478 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 C7orf26Q96N11 449 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 RBM24Q9BX46 236 aaKnown RBP20.33■□□□□ 0.85
CCDC9-204ENST00000599398 PRRG4Q9BZD6 226 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 PIGMQ9H3S5 423 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 CRIM1Q9NZV1 1036 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 PACSIN3Q9UKS6 424 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 ICAM5Q9UMF0 924 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 ZNF175Q9Y473 711 aa20.33■□□□□ 0.85
CCDC9-204ENST00000599398 ANKRD17O75179 2603 aaKnown RBP20.32■□□□□ 0.84
CCDC9-204ENST00000599398 SERINC4A6NH21 518 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 ENO4A6NNW6 628 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 ZNF195O14628 629 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 ZNF264O43296 627 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 CYP7B1O75881 506 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 SMNDC1O75940 238 aaKnown RBP eCLIP20.32■□□□□ 0.84
CCDC9-204ENST00000599398 GSNP06396 782 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 LINGO3P0C6S8 592 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 CAPN3P20807 821 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 EIF1P41567 113 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms