RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 APOOLQ6UXV4 268 aa15.07■□□□□ 0
USB1-211ENST00000565662 FAM214BQ7L5A3 538 aa15.07■□□□□ 0
USB1-211ENST00000565662 C6orf120Q7Z4R8 191 aa15.07■□□□□ 0
USB1-211ENST00000565662 STK32CQ86UX6 486 aa15.07■□□□□ 0
USB1-211ENST00000565662 GCNT2Q8N0V5 402 aa15.07■□□□□ 0
USB1-211ENST00000565662 CNEP1R1Q8N9A8 125 aa15.07■□□□□ 0
USB1-211ENST00000565662 ANKRD42Q8N9B4 389 aa15.07■□□□□ 0
USB1-211ENST00000565662 OR6K3Q8NGY3 331 aa15.07■□□□□ 0
USB1-211ENST00000565662 TMEM234Q8WY98 164 aa15.07■□□□□ 0
USB1-211ENST00000565662 ZNF845Q96IR2 970 aaPredicted RBP15.07■□□□□ 0
USB1-211ENST00000565662 ZNF395Q9H8N7 513 aaPredicted RBP15.07■□□□□ 0
USB1-211ENST00000565662 GALNT8Q9NY28 637 aa15.07■□□□□ 0
USB1-211ENST00000565662 ZNF226Q9NYT6 803 aa15.07■□□□□ 0
USB1-211ENST00000565662 BTNL2Q9UIR0 455 aa15.07■□□□□ 0
USB1-211ENST00000565662 SLC35A3Q9Y2D2 325 aa15.07■□□□□ 0
USB1-211ENST00000565662 CSMD1Q96PZ7 3565 aa15.06■□□□□ 0
USB1-211ENST00000565662 KDM4EB2RXH2 506 aaPredicted RBP15.06■□□□□ 0
USB1-211ENST00000565662 EIF1AYO14602 144 aaKnown RBP15.06■□□□□ 0
USB1-211ENST00000565662 ADAMDEC1O15204 470 aa15.06■□□□□ 0
USB1-211ENST00000565662 ZNF264O43296 627 aa15.06■□□□□ 0
USB1-211ENST00000565662 SNNO75324 88 aaPredicted RBP15.06■□□□□ 0
USB1-211ENST00000565662 UBL4AP11441 157 aa15.06■□□□□ 0
USB1-211ENST00000565662 PPP3CBP16298 524 aa15.06■□□□□ 0
USB1-211ENST00000565662 EIF1AXP47813 144 aaKnown RBP15.06■□□□□ 0
USB1-211ENST00000565662 CTBP2P56545 445 aa15.06■□□□□ 0
USB1-211ENST00000565662 IRX1P78414 480 aaPredicted RBP15.06■□□□□ 0
USB1-211ENST00000565662 SELENBP1Q13228 472 aa15.06■□□□□ 0
USB1-211ENST00000565662 RNPS1Q15287 305 aaKnown RBP15.06■□□□□ 0
USB1-211ENST00000565662 GSTA3Q16772 222 aa15.06■□□□□ 0
USB1-211ENST00000565662 MSANTD1Q6ZTZ1 278 aa15.06■□□□□ 0
USB1-211ENST00000565662 LUZP2Q86TE4 346 aa15.06■□□□□ 0
USB1-211ENST00000565662 OR2V1Q8NHB1 315 aa15.06■□□□□ 0
USB1-211ENST00000565662 ST8SIA1Q92185 356 aa15.06■□□□□ 0
USB1-211ENST00000565662 ARSGQ96EG1 525 aa15.06■□□□□ 0
USB1-211ENST00000565662 KLHL15Q96M94 604 aa15.06■□□□□ 0
USB1-211ENST00000565662 RTN4RQ9BZR6 473 aa15.06■□□□□ 0
USB1-211ENST00000565662 ZNF350Q9GZX5 532 aa15.06■□□□□ 0
USB1-211ENST00000565662 AIG1Q9NVV5 245 aa15.06■□□□□ 0
USB1-211ENST00000565662 PROCRQ9UNN8 238 aa15.06■□□□□ 0
USB1-211ENST00000565662 LIPT1Q9Y234 373 aa15.06■□□□□ 0
USB1-211ENST00000565662 SPIN1Q9Y657 262 aaPredicted RBP15.06■□□□□ 0
USB1-211ENST00000565662 SH3D21A4FU49 640 aa15.05■□□□□ -0
USB1-211ENST00000565662 B4DXG7 233 aa15.05■□□□□ -0
USB1-211ENST00000565662 NPIPB9F8W1W9 429 aa15.05■□□□□ -0
USB1-211ENST00000565662 SMNDC1O75940 238 aaKnown RBP eCLIP15.05■□□□□ -02e-6■■■■□ 22.6
USB1-211ENST00000565662 TGM6O95932 706 aa15.05■□□□□ -0
USB1-211ENST00000565662 IL6P05231 212 aa15.05■□□□□ -0
USB1-211ENST00000565662 LINGO3P0C6S8 592 aa15.05■□□□□ -0
USB1-211ENST00000565662 EFNA1P20827 205 aaPredicted RBP15.05■□□□□ -0
USB1-211ENST00000565662 TCEA1P23193 301 aaKnown RBP15.05■□□□□ -0
USB1-211ENST00000565662 CHI3L1P36222 383 aaPredicted RBP15.05■□□□□ -0
USB1-211ENST00000565662 CPOXP36551 454 aa15.05■□□□□ -0
USB1-211ENST00000565662 CD79BP40259 229 aa15.05■□□□□ -0
USB1-211ENST00000565662 ZNF117Q03924 483 aa15.05■□□□□ -0
USB1-211ENST00000565662 FOXF2Q12947 444 aa15.05■□□□□ -0
USB1-211ENST00000565662 GNA13Q14344 377 aa15.05■□□□□ -0
USB1-211ENST00000565662 CASP8Q14790 479 aa15.05■□□□□ -0
USB1-211ENST00000565662 ZNF141Q15928 474 aa15.05■□□□□ -0
USB1-211ENST00000565662 CCNJQ5T5M9 372 aa15.05■□□□□ -0
USB1-211ENST00000565662 AGBL2Q5U5Z8 902 aa15.05■□□□□ -0
USB1-211ENST00000565662 AP1ARQ63HQ0 302 aa15.05■□□□□ -0
USB1-211ENST00000565662 C3orf33Q6P1S2 294 aa15.05■□□□□ -0
USB1-211ENST00000565662 EIF3MQ7L2H7 374 aaKnown RBP15.05■□□□□ -0
USB1-211ENST00000565662 GGNQ86UU5 652 aa15.05■□□□□ -0
USB1-211ENST00000565662 SLC43A2Q8N370 569 aa15.05■□□□□ -0
USB1-211ENST00000565662 ZNF614Q8N883 585 aa15.05■□□□□ -0
USB1-211ENST00000565662 OR5W2Q8NH69 310 aa15.05■□□□□ -0
USB1-211ENST00000565662 OR5AK3PQ8NH89 298 aa15.05■□□□□ -0
USB1-211ENST00000565662 PIWIL2Q8TC59 973 aaKnown RBP15.05■□□□□ -0
USB1-211ENST00000565662 NEURL3Q96EH8 262 aa15.05■□□□□ -0
USB1-211ENST00000565662 SH3YL1Q96HL8 342 aaPredicted RBP15.05■□□□□ -0
USB1-211ENST00000565662 RNF145Q96MT1 663 aa15.05■□□□□ -0
USB1-211ENST00000565662 CCDC115Q96NT0 180 aa15.05■□□□□ -0
USB1-211ENST00000565662 SDF2Q99470 211 aa15.05■□□□□ -0
USB1-211ENST00000565662 USB1Q9BQ65 265 aaKnown RBP15.05■□□□□ -0
USB1-211ENST00000565662 GPATCH1Q9BRR8 931 aaKnown RBP15.05■□□□□ -0
USB1-211ENST00000565662 OR10A4Q9H209 315 aa15.05■□□□□ -0
USB1-211ENST00000565662 MANSC1Q9H8J5 431 aa15.05■□□□□ -0
USB1-211ENST00000565662 SERINC1Q9NRX5 453 aa15.05■□□□□ -0
USB1-211ENST00000565662 THUMPD1Q9NXG2 353 aaKnown RBP15.05■□□□□ -0
USB1-211ENST00000565662 KIAA1549Q9HCM3 1950 aa15.05■□□□□ -0
USB1-211ENST00000565662 MED12Q93074 2177 aa15.05■□□□□ -0
USB1-211ENST00000565662 ETV2O00321 342 aaPredicted RBP15.04■□□□□ -0
USB1-211ENST00000565662 ANKRD28O15084 1053 aa15.04■□□□□ -0
USB1-211ENST00000565662 SS18L1O75177 396 aaPredicted RBP15.04■□□□□ -0
USB1-211ENST00000565662 PGRP06401 933 aa15.04■□□□□ -0
USB1-211ENST00000565662 POU2F1P14859 743 aa15.04■□□□□ -0
USB1-211ENST00000565662 PGCP20142 388 aa15.04■□□□□ -0
USB1-211ENST00000565662 IL11P20809 199 aa15.04■□□□□ -0
USB1-211ENST00000565662 DNASE1P24855 282 aa15.04■□□□□ -0
USB1-211ENST00000565662 CLDN20P56880 219 aa15.04■□□□□ -0
USB1-211ENST00000565662 MAGOHP61326 146 aaKnown RBP15.04■□□□□ -0
USB1-211ENST00000565662 FAM174BQ3ZCQ3 159 aa15.04■□□□□ -0
USB1-211ENST00000565662 SLC25A53Q5H9E4 307 aa15.04■□□□□ -0
USB1-211ENST00000565662 BEND6Q5SZJ8 279 aaPredicted RBP15.04■□□□□ -0
USB1-211ENST00000565662 SAXO2Q658L1 398 aa15.04■□□□□ -0
USB1-211ENST00000565662 HBMQ6B0K9 141 aa15.04■□□□□ -0
USB1-211ENST00000565662 HEPHL1Q6MZM0 1159 aa15.04■□□□□ -0
USB1-211ENST00000565662 SSX8Q7RTT4 187 aa15.04■□□□□ -0
USB1-211ENST00000565662 CMIPQ8IY22 773 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms