RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MS4A14Q96JA4 679 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 DNAJC1Q96KC8 554 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CNDP1Q96KN2 507 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 TCEANC2Q96MN5 208 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 NT5C3AQ9H0P0 336 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 PARLQ9H300 379 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 TMEM245Q9H330 911 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SYTL2Q9HCH5 934 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 UBE2TQ9NPD8 197 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 DDX18Q9NVP1 670 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 NKIRAS1Q9NYS0 192 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 TAS2R1Q9NYW7 299 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF319Q9P2F9 582 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SPASTQ9UBP0 616 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 PCYOX1Q9UHG3 505 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 TSPAN16Q9UKR8 245 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 VANGL2Q9ULK5 521 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 PLA2G4CQ9UP65 541 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CLCA3PQ9Y6N3 262 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 AP1M2Q9Y6Q5 423 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 LAMA4Q16363 1823 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SLIT1O75093 1534 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 EDC4Q6P2E9 1401 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 MN1Q10571 1320 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 IGHV3OR16-10A0A075B7F0 116 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ARPC4-TTLL3A0A0A6YYG9 625 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 IGHV3-20A0A0C4DH32 117 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CCDC160A6NGH7 325 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM47DPA6NHR8 397 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CYSRT1A8MQ03 144 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 A8MU76 341 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 EVPLLA8MZ36 301 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 TNFSF12O43508 249 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM189A1O60320 539 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SNAP91O60641 907 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CDH16O75309 829 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SNX4O95219 450 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 HPRP00739 348 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CALCAP01258 141 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 MMP1P03956 469 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 HMGN1P05114 100 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SFTPBP07988 381 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SERPINF2P08697 491 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 RPS17P08708 135 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM228BP0C875 321 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 RPS2P15880 293 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CYP3A5P20815 502 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CXCR2P25025 360 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 EDNRAP25101 427 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CHRNA3P32297 505 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 FOXN2P32314 431 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 TUFMP49411 452 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 HNMTP50135 292 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SMSP52788 366 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 BLVRAP53004 296 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 IST1P53990 364 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 FKBP3Q00688 224 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 IFITM2Q01629 132 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 PAX8Q06710 450 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 FCHO2Q0JRZ9 810 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 STX3Q13277 289 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SPHARQ15513 63 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 C3AR1Q16581 482 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 LPAL2Q16609 132 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 DUSP7Q16829 419 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 UPP1Q16831 310 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SNAI3Q3KNW1 292 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ZBED5Q49AG3 693 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 KCTD21Q4G0X4 260 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 RFTN2Q52LD8 501 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SFT2D3Q587I9 215 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 HSP90AA4PQ58FG1 418 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 NANOGP8Q6NSW7 305 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC25A24Q6NUK1 477 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 TMEM64Q6YI46 380 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CDHR3Q6ZTQ4 885 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 GPRIN3Q6ZVF9 776 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CLVS1Q8IUQ0 354 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SERPINA12Q8IW75 414 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ELMOD2Q8IZ81 293 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 TRIML2Q8N7C3 387 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ICA1LQ8NDH6 482 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 GMCL1P1Q8NEA9 526 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 GRPEL2Q8TAA5 225 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 C8orf46Q8TAG6 207 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SPPL2AQ8TCT8 520 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 URGCPQ8TCY9 931 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 CD99L2Q8TCZ2 262 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 BRSK1Q8TDC3 778 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC13A3Q8WWT9 602 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ART4Q93070 314 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 VPS39Q96JC1 886 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF597Q96LX8 424 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 S1PR3Q99500 378 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 SSX3Q99909 188 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 TUBGCP2Q9BSJ2 902 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 FANCEQ9HB96 536 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ZCCHC3Q9NUD5 404 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 AGPAT5Q9NUQ2 364 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 PARVAQ9NVD7 372 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms