RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 VCANP13611 3396 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 AK4P27144 223 aaPredicted RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 HLA-DMAP28067 261 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 MAGEA11P43364 429 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SUOXP51687 545 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ARFIP1P53367 373 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PFN3P60673 137 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 BLOC1S1P78537 153 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 KIAA0040Q15053 153 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 LTB4RQ15722 352 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TUSC1Q2TAM9 212 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SLC8B1Q6J4K2 584 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TMEM81Q6P7N7 255 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 IDO2Q6ZQW0 420 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PRICKLE2Q7Z3G6 844 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 NANOGP1Q8N7R0 232 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TMEM99Q8N816 258 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ZSCAN1Q8NBB4 408 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR4D9Q8NGE8 314 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR52E2Q8NGJ4 325 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR5W2Q8NH69 310 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ADAMTS19Q8TE59 1207 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PAQR8Q8TEZ7 354 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TFGQ92734 400 aaPredicted RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 ZSWIM3Q96MP5 696 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PINK1Q9BXM7 581 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 FBXL4Q9UKA2 621 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 MRPS23Q9Y3D9 190 aaKnown RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 CEP250Q9BV73 2442 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 WASH3PC4AMC7 463 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PRODHO43272 600 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 CHP2O43745 196 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PTX3P26022 381 aaPredicted RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 AP1S2P56377 157 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TNFRSF17Q02223 184 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ELOAQ14241 798 aaKnown RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 PCGF3Q3KNV8 242 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PLK5Q496M5 336 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 LRIF1Q5T3J3 769 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SPRED2Q7Z698 418 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR2T33Q8NG76 320 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR11H7Q8NGC8 314 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 THEM6Q8WUY1 208 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TMEM255BQ8WV15 326 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 CREB3L1Q96BA8 519 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 RNF170Q96K19 258 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 C20orf24Q9BUV8 137 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PTDSS2Q9BVG9 487 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 BTBD2Q9BX70 525 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SLC12A9Q9BXP2 914 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 FAM124BQ9H5Z6 455 aaPredicted RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 WDR26Q9H7D7 661 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PLEKHB1Q9UF11 243 aaPredicted RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 PCDHGB1Q9Y5G3 927 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 COL4A6Q14031 1691 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR14I1A6ND48 311 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR6A2O95222 327 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 MMP12P39900 470 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SELENOPP49908 381 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 PGDP52209 483 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 S100A10P60903 97 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 BTN3A2P78410 334 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 E2F1Q01094 437 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 DOC2BQ14184 412 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.25□□□□□ -1.095e-18■□□□□ 10.6
RTN4-206ENST00000394611 JAGN1Q8N5M9 183 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 FAM46BQ96A09 425 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ZNF689Q96CS4 500 aaPredicted RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 LRRC46Q96FV0 321 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 HSPA12BQ96MM6 686 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ABHD1Q96SE0 405 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TMEM175Q9BSA9 504 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SPATA5L1Q9BVQ7 753 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 CHRDQ9H2X0 955 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 NOX3Q9HBY0 568 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 WASH6PQ9NQA3 447 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ASAH2Q9NR71 780 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 WDR45Q9Y484 360 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 AHCTF1Q8WYP5 2266 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 C5orf42Q9H799 3197 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 KANTRA0A1W2PQU2 76 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TVP23AA6NH52 213 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SLC31A1O15431 190 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 GPR37L1O60883 481 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 RGS9O75916 674 aaPredicted RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 HPXP02790 462 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 MT-ND5P03915 603 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 BIKQ13323 160 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 GAS6Q14393 721 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SMCO1Q147U7 214 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 HEPHL1Q6MZM0 1159 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 SFXN4Q6P4A7 337 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 CHRDL2Q6WN34 429 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 CD163Q86VB7 1156 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ATCAYQ86WG3 371 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 METTL27Q8N6F8 245 aaPredicted RBP8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR9A2Q8NGT5 310 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 OR10K1Q8NGX5 313 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ASB11Q8WXH4 323 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 GHSRQ92847 366 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms