RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 NUP205Q92621 2012 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 NHSL1Q5SYE7 1610 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 SGK494L7N484 410 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 SEC14L2O76054 403 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 SYNGR4O95473 234 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 AMY2AP04746 511 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 HBQ1P09105 142 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 ACPPP15309 386 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 PTH2RP49190 550 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 NFATC4Q14934 902 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 AFMIDQ63HM1 303 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 PLPP6Q8IY26 295 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 DIO2Q92813 273 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 THAP7Q9BT49 309 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 TPSD1Q9BZJ3 242 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 ERVK-19Q9WJR5 959 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 CACNG2Q9Y698 323 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 MEIOCA2RUB1 952 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 FAM183AA6NL82 134 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 TRIM64CA6NLI5 447 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 FAM155AB1AL88 458 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 H7C2Y5 167 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 H7C417 338 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 SYT5O00445 386 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 PFN3P60673 137 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 ACY1Q03154 408 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 C1orf189Q5VU69 101 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZC3H14Q6PJT7 736 aaKnown RBP16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 TPRA1Q86W33 373 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 MEX3DQ86XN8 651 aaKnown RBP16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 CPNE7Q9UBL6 633 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 A6NIZ1 184 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 SFTPBP07988 381 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 HNRNPFP52597 415 aaKnown RBP16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 RAP1BP61224 184 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 RAP1AP62834 184 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 GLO1Q04760 184 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 SYT6Q5T7P8 510 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 FCRLBQ6BAA4 426 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 CHTF18Q8WVB6 975 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 DEDD2Q8WXF8 326 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 MSANTD3Q96H12 275 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 STRADBQ9C0K7 418 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 MMP28Q9H239 520 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 FANCFQ9NPI8 374 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 NOX1Q9Y5S8 564 aa16.02■□□□□ 0.16
TRAPPC11-201ENST00000334690 NPIPA5A0A0B4J1W7 369 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 NPIPA7E9PJI5 369 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 ARHGAP33O14559 1287 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 NPIPA8P0DM63 369 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 HTR2BP41595 481 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 TLE3Q04726 772 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 CBFBQ13951 182 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 C3orf38Q5JPI3 329 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 CCNJQ5T5M9 372 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 HACD4Q5VWC8 232 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 RAET1LQ5VY80 246 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC46A3Q7Z3Q1 461 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 NOXA1Q86UR1 476 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 ELMOD2Q8IZ81 293 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 MFSD9Q8NBP5 474 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 OR52R1Q8NGF1 315 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 ARRDC3Q96B67 414 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 KCTD12Q96CX2 325 aaKnown RBP16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 DUS3LQ96G46 650 aaKnown RBP16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 NECAB3Q96P71 396 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC5A7Q9GZV3 580 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 SACM1LQ9NTJ5 587 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 POT1Q9NUX5 634 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 KCNN3Q9UGI6 736 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 SCN7AQ01118 1682 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 HMX3A6NHT5 357 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 GPRIN2O60269 458 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 ZDHHC11BP0C7U3 371 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 BCL7AQ4VC05 210 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 METAP1DQ6UB28 335 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 ADAMTSL4Q6UY14 1074 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 CNOT9Q92600 299 aaKnown RBP16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 DDIT4LQ96D03 193 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 CXorf36Q9H7Y0 433 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 KCMF1Q9P0J7 381 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 ABRACLQ9P1F3 81 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 B4GALT7Q9UBV7 327 aa16.02■□□□□ 0.15
TRAPPC11-201ENST00000334690 BLACEA4D250 179 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 HTR2AP28223 471 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 XCR1P46094 333 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 FGFBP1Q14512 234 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 OR1Q1Q15612 314 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 LYSMD1Q96S90 227 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 NKX2-4Q9H2Z4 354 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLA2Q9H6Q3 261 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 LDAHQ9H6V9 325 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 RASD1Q9Y272 281 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 SIPA1L3O60292 1781 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 ANKRD28O15084 1053 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 IL33O95760 270 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 IGLV3-27P01718 113 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 ZNF43P17038 809 aa16.01■□□□□ 0.15
TRAPPC11-201ENST00000334690 FAM69AQ5T7M9 428 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms