RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SIDT2Q8NBJ9 832 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 BBOF1Q8ND07 529 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SPATA18Q8TC71 538 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SAP25Q8TEE9 199 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 LRRC15Q8TF66 581 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 PAGE5Q96GU1 130 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 TTC25Q96NG3 672 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 TGS1Q96RS0 853 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 RANBP9Q96S59 729 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 CIB1Q99828 191 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ERP44Q9BS26 406 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 GON7Q9BXV9 100 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ACPTQ9BZG2 426 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 AZI2Q9H6S1 392 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 RMND5AQ9H871 391 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 POLD4Q9HCU8 107 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 S100A14Q9HCY8 104 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 TMEM9Q9P0T7 183 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SENP1Q9P0U3 644 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 PTBP2Q9UKA9 531 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 CFL2Q9Y281 166 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 TDRKHQ9Y2W6 561 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 MRPL11Q9Y3B7 192 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ETV7Q9Y603 341 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SPEF2Q9C093 1822 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 MYH7BA7E2Y1 1941 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 MYH13Q9UKX3 1938 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SF3B1O75533 1304 aaKnown RBP eCLIP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 PIK3C2BO00750 1634 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ALKQ9UM73 1620 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 RGPD1P0DJD0 1748 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ARHGEF35A5YM69 484 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SERINC4A6NH21 518 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC15A5A6NIM6 579 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SNTNA6NMZ2 147 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 RSPH10B2B2RC85 870 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 E7EWF7 191 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 LMO7DNF2Z398 122 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 AP3B1O00203 1094 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 POLR1CO15160 346 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 INPP4BO15327 924 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 GYG2O15488 501 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 YKT6O15498 198 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CLOCKO15516 846 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 B4GAT1O43505 415 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 NDUFA2O43678 99 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SULT1B1O43704 296 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CRLF1O75462 422 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 PALMO75781 387 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CIB2O75838 187 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 FGF19O95750 216 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 PDGFBP01127 241 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ABHD2P08910 425 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 MMP10P09238 476 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 RSPH10BP0C881 870 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ADORA3P0DMS8 318 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CALM1P0DP23 149 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CALM2P0DP24 149 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CALM3P0DP25 149 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 THRAP10827 490 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 KRT5P13647 590 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 IL10P22301 178 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 IFNA8P32881 189 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 FDFT1P37268 417 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ACAA2P42765 397 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CBX5P45973 191 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CCR4P51679 360 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 AP2S1P53680 142 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 UCP2P55851 309 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 KCNK10P57789 538 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CAV1Q03135 178 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 GABPAQ06546 454 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 RAD51Q06609 339 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CDC20Q12834 499 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 LY6DQ14210 128 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SELPLGQ14242 412 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 C16orf72Q14CZ0 275 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 TRADDQ15628 312 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 TOR1AIP1Q5JTV8 583 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 TCHHL1Q5QJ38 904 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 C6orf183Q5T699 404 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ATAD3BQ5T9A4 648 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 C12orf60Q5U649 245 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 LYPLAL1Q5VWZ2 237 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 RFWD3Q6PCD5 774 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 PEX26Q7Z412 305 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF589Q86UQ0 364 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 MYPOPQ86VE0 399 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM131BQ86XD5 332 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SYCE1Q8N0S2 351 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC43A2Q8N370 569 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 CLEC1AQ8NC01 280 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 OR10Z1Q8NGY1 313 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 NPRL2Q8WTW4 380 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 ANKRD49Q8WVL7 239 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SMPDL3AQ92484 453 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 HAS2Q92819 552 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC35C1Q96A29 364 aa3.19□□□□□ -1.9
ECHDC1-217ENST00000488087 MCUR1Q96AQ8 359 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms