RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 CATSPER1Q8NEC5 780 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 FDCSPQ8NFU4 85 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 SPPL2AQ8TCT8 520 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PAQR8Q8TEZ7 354 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 OIT3Q8WWZ8 545 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CNOT9Q92600 299 aaKnown RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 FAM162AQ96A26 154 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 SECISBP2Q96T21 854 aaKnown RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 SEPHS2Q99611 448 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 KLHDC3Q9BQ90 382 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PINK1Q9BXM7 581 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ANGPTL4Q9BY76 406 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 AMBRA1Q9C0C7 1298 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 NTN4Q9HB63 628 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CPNE5Q9HCH3 593 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 S100A14Q9HCY8 104 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 IL1RAPQ9NPH3 570 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 ARMC1Q9NVT9 282 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ADPRHL2Q9NX46 363 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 PGPEP1Q9NXJ5 209 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CNOT11Q9UKZ1 510 aaKnown RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 POLHQ9Y253 713 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 ANGPT4Q9Y264 503 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 SH3GLB1Q9Y371 365 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 RRP15Q9Y3B9 282 aaKnown RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 AP4S1Q9Y587 144 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 CHCHD2Q9Y6H1 151 aaPredicted RBP5.45□□□□□ -1.54
USP39-213ENST00000467885 DMXL2Q8TDJ6 3036 aa5.45□□□□□ -1.54
USP39-213ENST00000467885 C17orf51A8MQB3 221 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 K7EM74 188 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SYT5O00445 386 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 CIB2O75838 187 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 PRSS23O95084 383 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 LYPD3O95274 346 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 WISP1O95388 367 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ZNF682O95780 498 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 WDPCPO95876 746 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 THY1P04216 161 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 GPIP06744 558 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 NID1P14543 1247 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 IL7RP16871 459 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ZNF16P17020 682 aaPredicted RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 ATP6V1C1P21283 382 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ITGA3P26006 1051 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 DCTP40126 519 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 RFX3P48380 749 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 RNF144AP50876 292 aaPredicted RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 SSR4P51571 173 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 PSMD4P55036 377 aaKnown RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 VLDLRP98155 873 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 C17orf67Q0P5P2 114 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 PLCXD2Q0VAA5 305 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 MFAP5Q13361 173 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SNTA1Q13424 505 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 TUBA3CQ13748 450 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 EFR3AQ14156 821 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 LARS2Q15031 903 aaKnown RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 CD226Q15762 336 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 NPTX1Q15818 432 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 TBR1Q16650 682 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 NRF1Q16656 503 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 MTX3Q5HYI7 312 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ABHD17BQ5VST6 288 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 AGAP7PQ5VUJ5 663 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 IRAK1BP1Q5VVH5 260 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 BICRALQ6AI39 1079 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 TUBA3EQ6PEY2 450 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 CBLN3Q6UW01 205 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 LYPD4Q6UWN0 246 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 IGFL3Q6UXB1 125 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ISLR2Q6UXK2 745 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 UNQ6494/PRO21346Q6UXR6 183 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 LINC00114Q6XXX2 140 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ZNF836Q6ZNA1 936 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 LINC00696Q6ZRV3 163 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 FKBP9P1Q75LS8 142 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SPATA24Q86W54 205 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 C10orf67Q8IYJ2 551 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 LILRA2Q8N149 483 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 BEST3Q8N1M1 668 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 TMEM156Q8N614 296 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 WDSUB1Q8N9V3 476 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 FAM71CQ8NEG0 241 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 OR10G3Q8NGC4 313 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 OR6T1Q8NGN1 323 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 OR5M3Q8NGP4 307 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SLC22A8Q8TCC7 542 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SLC26A7Q8TE54 656 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 PHF10Q8WUB8 498 aaKnown RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 PYDC1Q8WXC3 89 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 POP5Q969H6 163 aaKnown RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 TMCO6Q96DC7 493 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SPACA9Q96E40 222 aaPredicted RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 TPD52L3Q96J77 140 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SGCZQ96LD1 299 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 LRGUKQ96M69 825 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 RNF145Q96MT1 663 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 AGAP4Q96P64 663 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SIGLEC12Q96PQ1 595 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms