RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TLX2O43763 284 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 HS6ST1O60243 411 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PLIN3O60664 434 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF217O75362 1048 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TOM1L1O75674 476 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 SULT1C4O75897 302 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 LGI1O95970 557 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 OPN1LWP04000 364 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR8G3PP0DMU2 310 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 MCF2P10911 925 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 COX4I1P13073 169 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF26P17031 533 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 MSH3P20585 1137 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CYP2B6P20813 491 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ACHEP22303 614 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ME2P23368 584 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 KDELR1P24390 212 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CHRNB4P30926 498 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ATP5C1P36542 298 aaKnown RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ELK3P41970 407 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 MAGEA12P43365 314 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMED10P49755 219 aaKnown RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 RAB28P51157 221 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 BCAP31P51572 246 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 HNRNPFP52597 415 aaKnown RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CRYBB1P53674 252 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PNLIPRP2P54317 469 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CLDN8P56748 225 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 C21orf59P57076 290 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ABCE1P61221 599 aaKnown RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSMC5P62195 406 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 MYBPC1Q00872 1141 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PLOD1Q02809 727 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TGM3Q08188 693 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 GAGE2BQ13066 116 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 FLOT2Q14254 428 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 FASTKD3Q14CZ7 662 aaKnown RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 RGS21Q2M5E4 152 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 GAGE2EQ4V326 116 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PIGGQ5H8A4 983 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 C6orf136Q5SQH8 315 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PIP5KL1Q5T9C9 394 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 IL23RQ5VWK5 629 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PRAMEF8Q5VWM4 474 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLX4IPQ5VYV7 408 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 LPCAT4Q643R3 524 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 KCTD11Q693B1 232 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 GAGE2AQ6NT46 116 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 NEPROQ6NW34 567 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 DNAJC24Q6P3W2 148 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 LRRC8BQ6P9F7 803 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TTC23LQ6PF05 361 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 DCUN1D2Q6PH85 259 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 EPGNQ6UW88 154 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC24A5Q71RS6 500 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 GPR141Q7Z602 305 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CCDC190Q86UF4 302 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 IQCHQ86VS3 1027 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CDR2LQ86X02 465 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZDHHC21Q8IVQ6 265 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 DEFB107AQ8IZN7 70 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 BATF2Q8N1L9 274 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CRYBG2Q8N1P7 616 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM161BQ8NDZ6 487 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ACTL9Q8TC94 416 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TFB1MQ8WVM0 346 aaKnown RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 FCAMRQ8WWV6 532 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PYDC1Q8WXC3 89 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 S100ZQ8WXG8 99 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 SEMA4DQ92854 862 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC45A3Q96JT2 553 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF641Q96N77 438 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 KLHL5Q96PQ7 755 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 OR2A14Q96R47 310 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 RANBP9Q96S59 729 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CYP2S1Q96SQ9 504 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 EBNA1BP2Q99848 306 aaKnown RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CBWD1Q9BRT8 395 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 LXNQ9BS40 222 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TMEM121Q9BTD3 319 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRIM15Q9C019 465 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CPVLQ9H3G5 476 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TDRD3Q9H7E2 651 aaKnown RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 GPN2Q9H9Y4 310 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 CYP3A43Q9HB55 503 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 NTN4Q9HB63 628 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 POPDC2Q9HBU9 364 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ANKHQ9HCJ1 492 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRPC7Q9HCX4 862 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 GID8Q9NWU2 228 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 RHBDL2Q9NX52 303 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 HAO2Q9NYQ3 351 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 ARMCX1Q9P291 453 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 GAGE2DQ9UEU5 116 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 TSPAN16Q9UKR8 245 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC22A14Q9Y267 594 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 PPIL1Q9Y3C6 166 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 COL5A3P25940 1745 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 MYH11P35749 1972 aa3.32□□□□□ -1.88
HMGB3P23-201ENST00000414981 A0A1W2PR77 199 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms